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Mutant Lines
54-2612-1

54-2612-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 15664893 [Map]; Strand: c
- AT4G32460.2 - [+] show detail - Protein of unknown function, DUF642
  Distance: 0; Region: exon1 (5UTR)
- AT4G32460.1 - [+] show detail - Protein of unknown function, DUF642
  Distance: 0; Region: exon1 (5UTR)

TAAACATTCC TTCTCTCGCT CACTCTTCTC CAATCCTTAT TTTATTTTTT 
GAAAGTTTAA AATTTTATAC AACATATCAA TTTGGGGTAG AAAAATTCGA 
AAGAAATGAA AGAGATGGGA GTGATAGTGC TTCTTCTACT TCACTCGTTC 
TTCTACGTTG CCTTTTGCTT CAATGATGGT AAATCCCTCG TTCTTTATCT 
TTTCCGTAGA AATCTCGCAT TTTCGTATCT TGTCTATATA CTAGCCAAAC 
CAAAAAAAGA AACTCGTAGT GAGTTCCAAC AATATTCTAG TATTTAAGAA 
ATTCGTGTTA TAAAAATTTG TACAGCTTCT TATAACTTGT GTGTCCAAAA 
TTTTGTTTGT CGTCAAAATA ATTCATTTAT ATTGCACCAC AAATCATGAA 
GAATGACCTA TTAGCTTGAC GAACATGTTG AACACTACGC CGAGACAGAT 
CTGTAAATGC ACATGGTGTT TAGTCAATCG TTTTCAATAA ATGTGTCACT 
AAATTACCCT CACCTTCCCA TCTGTAACTA ACCTTTTTAA TCATTTAAAT 
ATTTCATACT TCCAACTTTT TATTCAATTA TTATACACTG ATCACTTGTT 
TATTCATATA CAGATCTAAA ATAGCAAGAT TGAGAATTTG TTTACCTAGA 
ATCACTGTCA ATTTTAGGTG ACTAGATGCA GTTGAAGTTC AAATATTATT 
GNCAGCAATN

3 prime edge [+] show sequence

Chromosome: 4; Position: 15664968 [Map]; Strand: c
- AT4G32460.2 - [+] show detail - Protein of unknown function, DUF642
  Distance: -20; Region: promoter
- AT4G32460.1 - [+] show detail - Protein of unknown function, DUF642
  Distance: 0; Region: exon1 (5UTR)

TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTATGTTTAG 
TGGGAGTGGA ATAGAACGAG GAGGAGAGAG AGCTCTTATA TGCAAAATTG 
TGCAAGAAAG GCCCCTTTCC TTTGTCTAAA TTATGACTTT GCCACTAGTG 
ACTTATGTCG GAACAACATT GGTCCGGTTT TTTTATTCAT CGTTCCTTGG 
AAATGGGTCA CTTTTTCTTA GAAGGTTTGA CTAAATAACA CTGTCGATTT 
TTGGTTTGGT TGAATAAATT CGCAAATTGC CTATATTCCA TGGTAATTCT 
AGTGTTAAGT CGTGATTCCA TCATATATTC GTTTTTTAAG CGTCGTCTAG 
ATTGTATTCA TTTAACTTTG AGTAACGATA CCTAATGTCA TAATTGTTGC 
ATAAAAAGCA CTGATATTCG TATTTTCACT ACGAGATATC TTTCTTTTTG 
TTAGATTACC GAAAATAGAT TAAAGATGAA CAACTACGAT ATGTATATTA 
CGATTTGGAA AACGATAACT ATGTGATTAA TTAATGGTAA TATAATTGCG 
GGGGTGAAGA GGACAAAAGC TGTGGGACAA TGTGGTCTCT CACATGCCTA 
TTTCACATTG GTTCTCGCAT CGCCACAAGT TAAAGTTGCT TATGTTCCGA 
GTTATCCTAT CACAAACACA TAACGAATAA TATAAATATT ATTTATTATC 
AGAAAACAAT TCCGAATCAA CCAAACAGTT GCTTCGAAAG CT

AT4G32460.1

Model type: Protein coding
Short Description: Protein of unknown function, DUF642
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G11420.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G32460.2

Model type: Protein coding
Short Description: Protein of unknown function, DUF642
Computational Description: FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF642 (InterPro:IPR006946), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF642 (TAIR:AT5G11420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR