1. Home
  2. Mutant Lines
  3. 54-2615-1

54-2615-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26326412 [Map]; Strand: w
      • AT5G65790.1 - [+] show detail - myb domain protein 68
        Distance: 1834; Region: intergenic
      • AT5G65800.1 - [+] show detail - ACC synthase 5
        Distance: 4334; Region: intergenic
    Flanking Genome Sequence: 54-2615-1 - 5-prime edge 
    GCNGTTANAN AAACCCAAAA TGCGGCTTTT CGATNACGGT CGGTACGGGA 
    TTTTATACTT ACGTAACTAT GTAATCTTTT CTGTGACATA TTATCAATTC 
    ACGATCGTTA AAAATTTGTG TACATGTTAG AGTATAAAGA AGATTTTATG 
    TTGTTCAAAT TTATGTAGAC ATGATGGACT AATTGCACAC ATATAAAAAA 
    AAAAAGGGNT TGGNTTTAAC CNANGGCCCC TTTTCCCAAC CAANTNNNGN 
    CTACCNGCCC ATTTTTTTNG NAAANCCCTN ATTTNTTTTT GGGNTTTTTT 
    TTCCCNAAAA AGGNCTTTNT NTTTTGGGTT TNGTTAANCN NCCNTNNNTN 
    GNTNGNGGGC NCNTTTCCCC ANTTTTTTAT TTTAANTNTA TTTAAAAAAA 
    AAAANGTTTT TNGTTATNCC CNGTTTNGNC CNTCCTTCCC CTAANGGCCG 
    TTNNAAAAAA GGGGGGTTNN CCTGGAATTT TTGGNAAANC NGNCNGGTNC 
    NNTNTTNGCC GGGCNTTTTT TTTNGTTCCA AANNTTNTTT AAAANCGGAA 
    AACCNNCAAA CCNTTNNGGA ATNTNNCCCC CCNTTTNTTT TTTTTNACTA 
    AACNCCCCCC NTTGGGTTNA AGNNTTTTTT TTTNCCNAAT CCCGGNTTNT 
    TNGGGGGGGG AAAATTTGGG GGAACNTCCC CGGGGCCNGN CNNCCCCCCG 
    GGNNCNCTNA NAGNGGNNNG NNTGGCGTGN NNTNCCCNGT TNNNNCTNNN 
    NTNGNCCCCT NNNNNGGNNN TNGTNCGNCN TCCNCANAGA AANAAAANAA 
    AAAAAAAAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26326385 [Map]; Strand: w
      • AT5G65790.1 - [+] show detail - myb domain protein 68
        Distance: 1807; Region: intergenic
      • AT5G65800.1 - [+] show detail - ACC synthase 5
        Distance: 4361; Region: intergenic
    Flanking Genome Sequence: 54-2615-1 - 3-prime edge 
    AATGAAAACG GTAGCAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
    CCACACCATG TTAGTGTCGA ATACGTTAGA TCATGTGAAC TATTGAAATT 
    TACATCTCCG TATATTTATA GTATAGTATT ATTGTATTTC TCTAAGTGGG 
    TTTGATAAAC CCATCTTTTA TATATGTAGC CTTTTTAAAG TCAATGTTAG 
    AATACTGAAN GNGNCGCCNT NTCCCGGGGT AAAAGACGAN AAATTCTANT 
    ATNNGTCTCG GCCTAGGNGG CTTCTGNACT ATAGAAGANA NATACCNATN 
    GTGTNACAAC AATNATTAAT AGAAANAAAC ATTTNTNNAG GCANTAAANC 
    GTTGANCTTC AANANANAAC AATNANTNAG ANNNGTNCCA ACNCNAAGAA 
    AAANAGANGT NTNACCNCCT CNAAGAAAGC GGGGGGNCNA GCNNAACNAC 
    NCTCTNTTGG CAGNGGGGGG GGTCTGAGCA TNACANAATA ANGAAGTGTC 
    TCCTNCAAAA ACTCTTTANC CTGTGGGACG AGCGGCGGCC CATGNTNNGG 
    NCCCCCCTNC NCCTAAAAAA AAAANAATCG TCCNCNACCC CCCNNGNTTG 
    NGGTGGGGAC NAAAAAANAT ATTTCANGGN GGNTCNNNCC NGNGNANAAT 
    AAAAAAACGG GAAATNNNNC CCNTTNTTNT GGGGGGTGNN GGGGGNAAAA 
    AAAANNGANC NCCNTACATA TTTTTTTTNG CCGACNAANN CNCCNNNCNA 
    NAANGGGGNN NNNCTTTNNT TGNTNNNNAA NNGGAGGGAG GNNTAAATCT 
    TTTTTT

AT5G65790.1

Model type
Protein coding
Short Description
myb domain protein 68
Curator Summary
Encodes a putative MYB transcription factor.
Computational Description
myb domain protein 68 (MYB68); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 84 (TAIR:AT3G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65800.1

Model type
Protein coding
Short Description
ACC synthase 5
Curator Summary
1-aminocyclopropane-1-carboxylate synthase (ACS) is encoded by a multigene family consisting of at least five members whose expression is induced by hormones, developmental signals, and protein synthesis inhibition.
Computational Description
ACC synthase 5 (ACS5); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 9 (TAIR:AT3G49700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR