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54-2741-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26509365 [Map]; Strand: w
      • AT5G66360.1 - [+] show detail - Ribosomal RNA adenine dimethylase family protein
        Distance: -864; Region: promoter
      • AT5G66360.2 - [+] show detail - Ribosomal RNA adenine dimethylase family protein
        Distance: -864; Region: promoter
    Flanking Genome Sequence: 54-2741-1 - 3-prime edge 
    GGTGANNANA NAAAAAAAAA AGAAACTNNT TTTGGGACNN GGTCCCTTTT 
    TGACNGGGAC CNAACCGGTT TCATCCCAAC CNANNANCAC CCGNTTTATC 
    ANCTTAGTAA TATCTNGCCA TTTTTCAACA TNCAACAGCA AAANNGTTTG 
    GGTNGAGTTT GGCAGAGTTG CGTTATGGAG ATCTCANGTT GGTTTTAGGG 
    AAATTTNGGG GTTAAAGTAA GCTCTGAGTG GATTATATAA GTAGATTTTG 
    TCGCATCTAA TANCTCAGTG TGATATATCA GCTNAGAAAG ACTATACGCA 
    GTNTCTGNAT GTGCATGACC ATGACCATGG CATTGGGAGG AACCANAACT 
    CCACNTTCCC TNGGGACCCA CNTGANCCAA ANNGANTNTA TANGTTNTTN 
    CTTTCTTCCT TNATTCAANG ANGCNAGTNT TTNTCTGGGC CACGGGANAA 
    NCNNNTNNNC ATNNNTATCC NATANAANGG NTANGGGGGC CTTTGAANGG 
    TGAAANGGNA TNACAAACCC GGGCCNGNAG ACNAGGGCGT GCGCTAGAAN 
    GTATCGNNTC CNCNCACGCC NNCCNCGCGC CCAGGCNGCG CNCGNNNCNN 
    ACTTNTNCGC GTTNGTCGGC TCAGNATTNN GCATNTNTNG GGTNNNTCTG 
    GTTGCGNNTT CNNANCGCGA TCGATNNTGN NTAAGACGNT NNTGCCTNTC 
    NNCTGTAGAN ATACAGNGGA NNNGTNNGAG NTGANNCNTN CGCNGNTNNN 
    GNGTGTNCNG CGANNCNGNN NGGATNANAG TNCGCCCCNG TCNTGCTNNA 
    GGANCNNGNN NGAGNTGNCN TANCNNNGNG GTNNCNNGGT NNANACAGTN 
    NNNAAANAAA NAAA

AT5G66360.1

Model type
Protein coding
Short Description
Ribosomal RNA adenine dimethylase family protein
Computational Description
Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity; INVOLVED IN: rRNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT2G47420.1); Has 10133 Blast hits to 10130 proteins in 3048 species: Archae - 291; Bacteria - 6778; Metazoa - 278; Fungi - 201; Plants - 119; Viruses - 0; Other Eukaryotes - 2466 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66360.2

Model type
Protein coding
Short Description
Ribosomal RNA adenine dimethylase family protein
Computational Description
Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT2G47420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR