Home
Mutant Lines
54-2781-1

54-2781-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26509389 [Map]; Strand: c
- AT5G66360.1 - [+] show detail - Ribosomal RNA adenine dimethylase family protein
  Distance: -840; Region: promoter
- AT5G66360.2 - [+] show detail - Ribosomal RNA adenine dimethylase family protein
  Distance: -840; Region: promoter

GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCTA TACTATAACT TTGATACCAC CCTTCGTTTC 
TAGTGTGGGG GATTTTCAAT AACCCATGAG CACCCGATCT ATCAACTTAG 
TTATATCTTG CCATTTTTCA ACATACAACA GCAAAACTGT TTTGGTTGAG 
TTTTGCGAGT TTGTTATGTG ATTCACGTTT GTTTTAGTGA AATTTTGGGT 
TAAAGTAAGT CGAGTGGATT ATATAAGTAG ATTTTGTCGC ATCTAATAAC 
TCAGTTGATA TATCAGCTTA GAAAGACTAT ACGCGTCTCT GCATGTGCAT 
GAGCATGAGC ATGGCATTTG GAGGAACCAT GACTCCACTT CCTTGGGACC 
CACATGAACC AAATCACTCT CTATGTTTTT TCTTTCTTCC TTTATTCAAT 
GATGCAATCT TCTCTTGAGC AATGAGAAAC ATATAATCAT TAATATACAT 
AAATGTAAAG GGGGCCTTTG AAGGTGAAAT GGGATC

3 prime edge [+] show sequence

Chromosome: 5; Position: 26509394 [Map]; Strand: c
- AT5G66360.1 - [+] show detail - Ribosomal RNA adenine dimethylase family protein
  Distance: -835; Region: promoter
- AT5G66360.2 - [+] show detail - Ribosomal RNA adenine dimethylase family protein
  Distance: -835; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAT 
AGAGGCTGCT GTAAAAAAAG TGGACCACTA TTTTTCACGC CTAATTTTCT 
TAATTACTCT ATTATTGTTA ATTCCGAAGT TACAAACCCT AAATTATAAG 
GCTAGCCTTT ATATTTATAG CATGTTCTTC TGAAGCTGAT ACAGTTTTCA 
ACACATGTAT CCATCATAGG AGAAATAAAA ACACCAAAAG AAACTGAATC 
GAATTGTGAC GCTTTTTCAT GTGATAATAC ACATTATTTT GTTTTTTGTG 
TGTGTTTATT TTGCTTAATT TTAACATTTT CATATGAGTA CCATAGGGAA 
TTAATCAAGA AAAGAGTGGT GTGTGACTGA GGTGATATAA TGTAAAGTAG 
AGAGTGTTGA CAGATGTCAT GATAATGAAA AAATCAACTG AAAGATATAT 
ATGTTTACAC AATAAATCAA AATTTGGATG GAAGGGACAA AAGGAAGCAT 
ATATACCGTC CGATCATGTA GAAAAGAGAT AGCAATTACA CCGACGAGAA 
TAGTAACTTG GCAACGTCAT GCTTTCTTTT CAAGATTATA TGAATTTTCA 
AACTTTATGT TCTTCCAAAT AATTAGACGA CTTCATGGCT CTCACGTTAC 
CATTTGAGTA CGTAGTCCAC TAGCGTGGTC CAAAATTCTA TATCCATCAT 
TTTTTGGTCT TTTTCTTTTA TTTTACAATC AATCAATCTA TGGATGTACA 
TATAA

AT5G66360.1

Model type: Protein coding
Short Description: Ribosomal RNA adenine dimethylase family protein
Computational Description: Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity; INVOLVED IN: rRNA modification; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT2G47420.1); Has 10133 Blast hits to 10130 proteins in 3048 species: Archae - 291; Bacteria - 6778; Metazoa - 278; Fungi - 201; Plants - 119; Viruses - 0; Other Eukaryotes - 2466 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66360.2

Model type: Protein coding
Short Description: Ribosomal RNA adenine dimethylase family protein
Computational Description: Ribosomal RNA adenine dimethylase family protein; FUNCTIONS IN: rRNA methyltransferase activity, rRNA (adenine-N6,N6-)-dimethyltransferase activity, rRNA (adenine) methyltransferase activity; INVOLVED IN: rRNA modification, rRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal RNA adenine methylase transferase, N-terminal (InterPro:IPR020598), Ribosomal RNA adenine dimethylase (InterPro:IPR011530), Ribosomal RNA adenine methylase transferase, conserved site (InterPro:IPR020596), Ribosomal RNA adenine methylase transferase (InterPro:IPR001737); BEST Arabidopsis thaliana protein match is: Ribosomal RNA adenine dimethylase family protein (TAIR:AT2G47420.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR