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54-2807-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16709877 [Map]; Strand: w
      • AT4G35100.2 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: exon4 (CDS)
      • AT4G35100.1 - [+] show detail - plasma membrane intrinsic protein 3
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 54-2807-1 - 3-prime edge 
    ATTTAGNCNG NTGAGGTATT TTATCGACCG NTACCGACCG TTTTNATAGT 
    GCAGCTAGTG CTCCNAANAA CGGANCAACC CATAAGATTC ACTGCAAAAC 
    CAAAACCAAC ACAGAACCAN CATTAGGACA TGATGTCATG ANTGATTAGT 
    GAAGTACCTA ATCCAGATAA TAACTAAACA CGTTACTTGG TCATNCCACG 
    CCTTCTCGTT GTTGTAGATA AC

AT4G35100.1

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 3
Curator Summary
a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP
Computational Description
plasma membrane intrinsic protein 3 (PIP3); FUNCTIONS IN: water channel activity; INVOLVED IN: response to salt stress, transport; LOCATED IN: anchored to plasma membrane, nucleus, plasma membrane, vacuole, membrane; EXPRESSED IN: guard cell, cultured cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1); Has 10883 Blast hits to 10871 proteins in 2222 species: Archae - 81; Bacteria - 5172; Metazoa - 1469; Fungi - 457; Plants - 2516; Viruses - 2; Other Eukaryotes - 1186 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35100.2

Model type
Protein coding
Short Description
plasma membrane intrinsic protein 3
Curator Summary
a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP
Computational Description
plasma membrane intrinsic protein 3 (PIP3); CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;8 (TAIR:AT2G16850.1).
Link
InterPro Scan - TAIR