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54-2814-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26517024 [Map]; Strand: c
      • AT5G66390.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 54-2814-1 - 5-prime edge 
    GTCTCAAGCT TAGCAAACTT TCGTAACGTT TAAAAACATA CGGAAGTTTT 
    CCAATCTTAA TACATTTTTC TCCTTGTGAT ATATTTGTGG TGCAGGGATG 
    TGATGCTTCC ATACTATTGG ATAGCAGTGG AACCATAATC AGCGAGAAAC 
    GATCAAACCC TAATAGAAAC TCAGCCCGTG GTTTCGAACT CATCGAGGAA 
    ATCAAACATG CCTTAGAACA AGAGTGTCCT GAAACAGTTT CTTGCGCTGA 
    TATCTTGGCT CTAGCCGCTA GAGACTCAAC TGTTATTGTA AGTACTCATC 
    ACAATTTACT ACACACAAAA TTAGTTGATT AGTACCAATA GTTTGACAAA 
    TGAAATAACA GACGGGTGGA CCGAGCTGGG AAGTACCTCT AGGAAGAAGA 
    GATGCGAGAG GAGCAAGCTT GAGTGGTTCC AACAATGACA TTCCTGCTCC 
    AAACAACACT TTTCAAACCA TCCTCACTAA GTTCAAGCGT CAAGGCCTTG 
    ATCTCGTCGA TCTTGTCTCC CTCTCTGGTA TACATATCTA TCCATCTTTA 
    TTACACAAAA CATTTTCAAC AACTTATTAA TATTTTAAGA AGCGGATACG 
    TATGATTTGT AGGAAGTCAC ACCATTGGGA AACTCGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26517140 [Map]; Strand: c
      • AT5G66390.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-2814-1 - 3-prime edge 
    CTTGAGACCT TGACGAAACA GTCGTGGAAA TGGAGTCTGA GCAAGGAGGC 
    AGGCATGCGA GGATCATGTT CGAATGCTTT AGCGACAATG GACTGAACAA 
    TCTCTTGAGC TTTAGGACAC GAGTGGTCAT AAAACTGAGG AAAGAGATAG 
    CCGCCACTTC CATAGGCTTT GGAACACAAA CAAAAAGGAG AAAATGCAAT 
    GAGCGAGAGA GCTGCAATAA GGATGTTCAA TGACTTGGCC ATTTTTTGGG 
    GGGATTCTTT CTCTTGATGA CTCGTTGTAT ATAACTCGGN TACTTGTGCT 
    TGGTGATTGT GTGNGATGCC AAGGGGNGCG TTTATNGAGN ATANNTNGGN 
    GGNCNATTNA AAAANAANNT TNGANNNCNN NNNNAAANAA AAANTNNAAA 
    CCNGGGGNTG NTTTTTTNAN NNNCCCCNTN NGGGGGGGNT TTNNGAAAAA 
    AANNCNNNGG GNNNNNNNAA NTTTTTTNNN ATTNTTTTNT NCCCNNNNAA 
    NNNCCNTTNT ANNNNAAAAA AANNGGGGGN TTNNNNNNNC NNNNNNNNTN 
    NNGAANANNN NTNNNNNNTT TTTTTTTTTN NGGGGGGGGC CCCCCCCNNN 
    C

AT5G66390.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: response to oxidative stress, oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, hypocotyl, root, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G50990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR