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54-2833-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17911320 [Map]; Strand: c
      • AT4G38190.1 - [+] show detail - cellulose synthase like D4
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-2833-1 - 5-prime edge 
    GGAACAGGTA CTATGTTTAG GCGCTTTGCT CTCTATGGTT TTGATCCACC 
    CAACCCTGAC AAGCTTCTTG AGAAGAAGGA ATCAGAAACA GAGGCTCTAA 
    CCACCAGTGA CTTTGACCCG GACCTTGATG TCACACAACT CCCCAAGCGC 
    TTTGGGAACT CCACACTCCT AGCTGAGTCA ATTCCAATTG CAGAGTTCCA 
    AGGTCGTCCA TTGGCAGACC ACCCGGCTGT CAAGTACGGT CGTCCTCCCG 
    GAGCCCTTAG AGTCCCTCGT GACCCACTTG ATGCTACCAC TGTCGCAGAG 
    TCTGTTTCTG TAATCTCTTG TTGGTATGAG GATAAAACGG AGTGGGGAGA 
    TAGAGTTGGA TGGATTTATG GGTCGGTGAC AGAGGACGTG GTCACAGGAT 
    ACCGCATGCA TAATCGTGGG TGGCGCTCGG TTTACTGCAT CACTAAGCGA 
    GATTCTTTTC GAGGCTCTGC ACCCATTAAT CTNACGGATC GTCTTCACCA 
    GGTGTTGCGG TGGGCCACTG GGTCTGTTGA GATC

AT4G38190.1

Model type
Protein coding
Short Description
cellulose synthase like D4
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase like D4 (CSLD4); CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose synthase-like D3 (TAIR:AT3G03050.1); Has 3503 Blast hits to 2866 proteins in 674 species: Archae - 22; Bacteria - 1611; Metazoa - 5; Fungi - 10; Plants - 1761; Viruses - 2; Other Eukaryotes - 92 (source: NCBI BLink).
Link
InterPro Scan - TAIR