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Mutant Lines
54-2850-2

54-2850-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 323672 [Map]; Strand: c
- AT2G01730.1 - [+] show detail - cleavage and polyadenylation specificity factor 73 kDa subunit-II
  Distance: 0; Region: exon13 (CDS)
- AT2G01735.1 - [+] show detail - RING-finger protein for embryogenesis
  Distance: -800; Region: promoter

GCTTCGATGC ATACACTTGT CTTTTAGACA CAAAGAGCCC TTGAAAGATG 
CAACCTGCAA ACAGTTTTCA GATTCATGGA TCTGAGCACC AGACACTGTC 
TTCAAGATCT TTGCAGACAA TTGTTTGATT AGATCAACAT CATCATCTTC 
TGATTCTCCT TTAACTTTCA CTGGACAACA ATGAGCTAAA GAGACCACAT 
GGTTTTTCTC ATGTAACACC TCAGAGATTT CATCTTGGTG AACTATCTTT 
GCCTTTTTGC TCTTCTCTAT TACCAAAACC CCGTCTGCGG TTCTATGGTC 
TGTAACACGG AGCTGAGTAG AGTTTGAGAA TTTGAAATTC GGGTTGGAGC 
AGCTTTTTAG GAACATATCA GAAGCGTTTG CTTTTATATA AGTGGTTGAA 
GCGAATGAAA CTGTTTCGCC ATTGGCAGGG ACGAAACAGG GGATGTCAAG 
CTCTGAGGTT ATCTTTTCCT TAAGAATCAT CATGCTGGGT TTTTCGCCGT 
GCACGAGTAC AACGTTCTTT GGGGAAAGGA ACTTTGTGAG ATCCATTATT 
CCTTTTGCAT CTGTGTGAGG ACTGAAAGCC ACTTGATGTA CCTGATAACA 
ACAGAATCAA CAAGACATTT TAGTTTANGT TCAACGTGTG AATTGGACGC 
ATTGCTGTTT TCGTGTTAAG GGTTACATAA ATTTTGTGAG AACCAGAAGA 
AAG

3 prime edge [+] show sequence

Chromosome: 2; Position: 323788 [Map]; Strand: c
- AT2G01730.1 - [+] show detail - cleavage and polyadenylation specificity factor 73 kDa subunit-II
  Distance: 0; Region: exon13 (CDS)
- AT2G01735.1 - [+] show detail - RING-finger protein for embryogenesis
  Distance: -684; Region: promoter

ATCGAAGCAG TAGTAGTAGT AGTGAAGCTG TGTTCTTGTG TTGCAACTGG 
TCTATCGCAG ATTTAGAGCT TGGCTGGGAA ATCATCAATG CTATCAAACT 
AAATCACTGA TTCTTGTAAC ACTGAGAAGT GTTTTCAGTT TTTGTCGTTT 
TTCTGTCGGC ATATGTAAAA GTTTTGATCC TAGTAAATTA AATTAACCCA 
GTAGTAACTA AACTTACCAA CTTTAGCGCC AATTTCTATC TAACAAAGTA 
ACACCCGTAT TAAAAACCGG AACCAATTAC CCGAAACTGA ATCTGAATCC 
GAAAATTTAC TTGTGTCCTA AATTCTTCTA CCCTAAAAAC CAAATCTGAA 
GTCGAACCCA AAAATACATG AATATTTTAA TCAAAAATTT AAATTTTATT 
CGAAATCCGA AAAATTTGCA TATTTACCCG CAAAATCAAG TATGGTTCTA 
AAAAAGGCCT AAAATCTATA CACGAACCGA TATTTTAGAT TTACCCTATA 
GAATCCTAAA CTTCTCTACC CGAAAAACCG TATTCGATCG AATTTTACCC 
GAATCCGACC CGTTTATCCG AATGGCCACT CCTAACCGGA TC

AT2G01730.1

Model type: Protein coding
Short Description: cleavage and polyadenylation specificity factor 73 kDa subunit-II
Curator Summary: a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo
Computational Description: cleavage and polyadenylation specificity factor 73 kDa subunit-II (CPSF73-II); CONTAINS InterPro DOMAIN/s: RNA-metabolising metallo-beta-lactamase (InterPro:IPR011108), Beta-Casp domain (InterPro:IPR022712), Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73-I (TAIR:AT1G61010.3); Has 5072 Blast hits to 5039 proteins in 1435 species: Archae - 491; Bacteria - 2753; Metazoa - 569; Fungi - 259; Plants - 193; Viruses - 0; Other Eukaryotes - 807 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01735.1

Model type: Protein coding
Short Description: RING-finger protein for embryogenesis
Curator Summary: encodes a RING-H2 zinc finger protein essential for seed development.
Computational Description: RING-finger protein for embryogenesis (RIE1); FUNCTIONS IN: zinc ion binding; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G68070.1); Has 9688 Blast hits to 9662 proteins in 283 species: Archae - 0; Bacteria - 6; Metazoa - 2533; Fungi - 743; Plants - 5052; Viruses - 40; Other Eukaryotes - 1314 (source: NCBI BLink).
Link: InterPro Scan - TAIR