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54-2863-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17207024 [Map]; Strand: c
      • AT2G41260.2 - [+] show detail - glycine-rich protein / late embryogenesis abundant protein (M17)
        Distance: 0; Region: exon2 (CDS)
      • AT2G41260.1 - [+] show detail - glycine-rich protein / late embryogenesis abundant protein (M17)
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 54-2863-1 - 5-prime edge 
    GNGNAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCACA AACATAGAGA GTTTGTATTA CACGCAATTC 
    ATGGCTTAGC TTGTTGGGCC TCAACAGTTT CCACAACCTC GTTTGCCTCG 
    GCTTGACTCC TGCAACAGTA TCTGCACCGT CCACGCCACC ACCCACCGCA 
    ACATCCCCAC CTACAACCAC CACGGCCACC NCANTCTTGN TGGGGCTCTA 
    CAACAGGGTC ATNGGCCTGA NCTTGGGCTT CCGNCGATNT GGGGTTTACC 
    GNCATGTNTG GTGCTCCTCT ANNGTATGGG TNGCGTTTAG TNCATTGGCT 
    NACANTTCAT ACTTTAGATG CACAGTGTAA TAATATACAT GTNTTACACC 
    ATCGATCAAA TATTNAATCC ATAGTTACGC GAAAGTGTAA AAGAGAACTA 
    CAAATATANA GTTGTACATA CCGTGTGTGG CATCGCTGGA TGTGTTCGGG 
    AAAACAGCGA CGGAGAAAGA NAAGAGCANA GCCAAGAGAA CGAGAGACTN 
    GAGGTTTCCC ATATTTTGTT TTAGTTACAC AAAACACGTA TATTGAAGAG 
    TGCATGAGCA CAGCACATAT TTATAGTTGG GCANCAAAAC TTGGCGACAA 
    GAAACCAGTC TACTNTGTCG AGTGAGGGAA GATAATGAGT NAATGACATA 
    TTTATTTAAG GGGATATATN TATATATACA CATGTATAAA ATGTAGAGAA 
    AATCATTTTA AAAGATCGCT ATAANNCATG CC

AT2G41260.1

Model type
Protein coding
Short Description
glycine-rich protein / late embryogenesis abundant protein (M17)
Curator Summary
Late-embryogenesis-abundant gene. Involved in the acquisition of desiccation tolerance during late phase of embryogenesis.
Computational Description
M17; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein (M10) / LEA protein M10 (TAIR:AT2G41280.1); Has 3422 Blast hits to 2401 proteins in 322 species: Archae - 2; Bacteria - 405; Metazoa - 1403; Fungi - 273; Plants - 1003; Viruses - 37; Other Eukaryotes - 299 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G41260.2

Model type
Protein coding
Short Description
glycine-rich protein / late embryogenesis abundant protein (M17)
Curator Summary
Late-embryogenesis-abundant gene. Involved in the acquisition of desiccation tolerance during late phase of embryogenesis.
Computational Description
M17; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development; LOCATED IN: endomembrane system; EXPRESSED IN: cotyledon; BEST Arabidopsis thaliana protein match is: late embryogenesis abundant protein (M10) / LEA protein M10 (TAIR:AT2G41280.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR