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Mutant Lines
54-3063-1

54-3063-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 42850 [Map]; Strand: c
  - AT4G00120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-3063-1 - 5-prime edge
```
GNGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATTACG TAAGGATAAG CGACGATCCT CAGACGGTGG 
TTGCTCGTCG GCGTCGGGAA AGGATCAGCG AGAAGATCCG AATT
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 240025 [Map]; Strand: c
- AT4G00550.1 - [+] show detail - digalactosyl diacylglycerol deficient 2
  Distance: 0; Region: exon2 (5UTR)

CTAGCTGTTG TAAATATCGC AATGTGTTGC TCCTGCTGAT TCGTCATATC 
ATCTCAAGCT AAACCTCTAC AAATTATCAA ACAAAAAGAC TAAACCAATA 
GATTCTTGTA ATTGAGTTTG ATCTGATTAT TGCATCTTCC CAATAAGGAT 
AACATTCGAC TACAAATTCT TAATTTTTCT GCAAATTCAA ACAATCTTTT 
CACACGATTC AAGCGATTTT CGATTACATC AAAAAAAAAA AAAAAAAAAA 
ANTNGGGNCC CCCCCNNGNA AAANCCNNNT NAAAAAANAT TTTTNGGNNG 
NNNAAANTTN NAAAANCNNN NNNNTCCCNN NNNGGGGGGG NNAAAAANCN 
NCCCNNNNNG GGNNAANNNN NAANNNNTTT TTTNGGGNTT NCCNNAAAAN 
NNAAAAANNT TTNGGNNAAA ANTTTTNNNN TNNNTNGNNN AANNAAAAAA 
AAAAAANGGG GGGGNTTTTN NNNNNAAANN NNCCNGGGNN GGNACCCGNG 
GNNNTTTTTT TAAAA

AT4G00120.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: INDEHISCENT (IND); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G09750.1); Has 2280 Blast hits to 2276 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00550.1

Model type: Protein coding
Short Description: digalactosyl diacylglycerol deficient 2
Curator Summary: encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.
Computational Description: digalactosyl diacylglycerol deficient 2 (DGD2); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR