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Mutant Lines
54-3084-1

54-3084-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 69172 [Map]; Strand: w
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: 3693; Region: intergenic
- AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 101; Region: intergenic

ATAACCACAT TTTCAGTCAA AGAAAACCCA ATAAAATCAA TTAGATGGAA 
ATAGCAGGGG CTCATTGGGA GAATTTAGCT CATTTCCTAA GTTCTTCTTC 
ACTTGTTACA AGTTCTCTGA ATCATGGATT CGATAGATCT GGTTATCATT 
CATCAATTAT TTGGTTACGT GATTTTAAGA CAAAGATTTA GGACTGTATT 
ATTCAAATGA ACCAAAACAT AACTCTTTTT TCTGAAAATA TTGCATAAAC 
GAATACAATA ATACAAGGCA CTATCTCTGA GTCTCGGAAC GTTCTTTCTT 
TGATTAAGGG AGACAGAGCA CACATAATAA TATCAGCAGA CGAATCCCTG 
AGGAACATTT TTGCCGCAAG AGTTGAGAAG CAGAGTGAGA GCAACGGGAA 
TTTTGACAGG AGCAACTCCG AGAATGCTGG TTTTAAGTGC AGTGCACAGA 
CAAACGGCAG CTTCAAAGTC AGCCAAACCT TTGATGAGCG AGCAACACTC 
CTGGCTCGGT GGTGTACCGA TGACCTCACT AACCAGACCT AACCAGCTCC 
CACACACTCC AAATTTGAGT GTGTCTCTTG GACATTTCGT GGTGGCTTGT 
TTTGCGGGAG GGGGAGGGCA TGGCTTGACG GTGGCTCCTG GTGTAACATG 
GCCGAAGAAG AATGTTATGT TAAGGAGCAG CAGATGAGAA GAGATCGCAA 
AGCTACCA

3 prime edge [+] show sequence

Chromosome: 4; Position: 69056 [Map]; Strand: w
- AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
  Distance: 3577; Region: intergenic
- AT4G00165.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 217; Region: intergenic

GTGGTTATTG AACTGCACGA TGCACAGTGC ATTGTTTGGC CGAGTTATAA 
TCACTAAGAG ACTTCTGTAT TTTAGAGTGT CATTCGATCA TCATAATGTG 
TTTTTTTTTT TTNCCCTTTG GGAAAAANGA AAAATTTNNN TTNNTTTTNN 
NTTNGGNNNA AACCNCCCNA AAAACCTAAA ACCNNNTNAA ANNATTNNCC 
AAAANTTNAA AANCNCCTTT CCNCCNNAAA ANNCAAGGGN TTCCNNCTAN 
GGGGCNAANC CCAANTNGNN NGGNAAANCC CCNTTNCCAA NCNCGGNAAC 
CNGGNAANTT NGGGGNNTNN CCCCAAACCC NAAAANNTAA ANTTCCCNCC 
CNGGNCCGNN ANCCNCCGNG NCCCCTTNAA AA

AT4G00160.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00165.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: N-terminal protein myristoylation, lipid transport; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT2G45180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR