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54-3113-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19609700 [Map]; Strand: c
      • AT2G47895.1 - [+] show detail - other RNA
        Distance: -773; Region: promoter
    Flanking Genome Sequence: 54-3113-1 - 5-prime edge 
    GGTCCAATCT CACTTTCTAA CATTACAACA AGTTCTTTTG CTGCTTGCTT 
    GTCTTGAGAT TGTATATAAC TGTGAACCAT GTTTTGTTCT GTGCTCGTCC 
    ATGCTTGCCC TTTGGCAAAT TAGGAATCGG AGGCAAAACA AAAAAAAAAC 
    TATTNTNAAG NGACAATTTT NAAAGNGNGG NCNATNTACA GGGATAACTC 
    CTAANCTTCC AACCCGGNCC NNAAACCACN CNNGCCCNTN TANAATTNAA 
    NNNNNCNTGG TNGCCTNNNN TGNAATNAAT TTTAAAACNT AAACCGGAAC 
    CCGGNTTTAN AAGGGGAAAA AATGGNACCN TNGNAAAAAA ANCNANGNCA 
    AAAAACTATT TNGNCNTTGG NTTNCCCTTG AAAACTNNCN GCCGGGCCGT 
    NNAACNNCCC NNNCCCTTNA ATNANNNNNA NNNNNNNNAN NNNNT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19609816 [Map]; Strand: c
      • AT2G47895.1 - [+] show detail - other RNA
        Distance: -657; Region: promoter
    Flanking Genome Sequence: 54-3113-1 - 3-prime edge 
    ATTGGACCCA TTAAAGATCC ATGGAGCAAG AAGGGCTTGA TGTAATTGAT 
    ATTATGGGCT CAAGTTGTAA CATAGTAAAC CCAATATAGG TTGGCATGTT 
    TGGGCCATTT TCTTTTAAAG CCCAAATATA AAAGCNGTCT CTTCCCGATG 
    GCCGGCGAAA CAGAAATTCC GCTGCCGTCG CAGCTTTCAC TCTTGTTTTT 
    TTATTCAGAT GAAATTGGAT GGCCGATGAA GACAAACATC CAAAGGCATG 
    GGCTCGCGGC AACAAATATT TGCAATCTAC CAATATATAA TAATCTGAGG 
    CAGTATAAAA ATACAAAAAA AAATGACAAC ACTTTTTGGC ANATCATTCC 
    TGCTACNATG AATCTGTCCC AATGATAATC TGANAAGTAA AGTAAGTTTT 
    GGTTGAACAA GGAATCTGGA GTGGGTTTTA CTTGTTGAGC AATCAGTAAG 
    CACTAAATCA TGTATCANAG TTGNGGTTAT ATTCTCTATG TTCTTCTTAN 
    AATT

AT2G47895.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT2G47900
Link
InterPro Scan - TAIR