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54-3122-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14677888 [Map]; Strand: c
      • AT2G34790.1 - [+] show detail - FAD-binding Berberine family protein
        Distance: -618; Region: promoter
    Flanking Genome Sequence: 54-3122-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTAT AATATGTCTG AATAATCATT ACAATATAGT 
    ATATACACAC AAAACTTATT GATACTATGC ATTCTCTTTG GCTATGTTGG 
    AAAATTCACT TGCATGACTT GTATAAACTT CTAAGTTATG CATGCNGTTT 
    TAAATAATCA AGTTACTACT ATAAATTAAG ATACAGGTAT GTATAGCAAT 
    TAATTAAAAA CTAATTAATA CAGTTTAGTA ATGAATAATG ATATAAACAT 
    TATACAGTAC AGTGTCGCTG TTTCAGTAAT GATATAATAT TCACATCAGA 
    TTTACATGTA AAGATTCAGA TCATAGCAAA TTAGCAATGA AGTAAAGGAC 
    AATGCAAGAA ATTGACCAAA TTACTTGAAT ATTCTAATAA TTCATTTCTT 
    TTCTTTTTTT GGTTGGCGAA ACATATATAT TTGGTTACGT TATATGCTTA 
    AGGGATATAC TGCTTATTTT TCAAGTAATC AAAATATAAA GATAGAATTA 
    TAGTAAGGAG ATAAAAGTTG AGATTTTAGT AATAGAATAA AAATAGTAAT 
    GAAGTAATAT TTACACCAAC TTTACGTGTA AGCCATCCCC ACACACACAT 
    CAACCTNCTA TATAAACCTA AACACATACC TCAAACAACC AAAAGCAAAA 
    ACCTCATCGA CATAAAAAGA AAAATGGCGT TTGCGATATC AAGCGAAACG 
    CAACCTTGTT TCTTGTACN

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14638218 [Map]; Strand: w
      • AT2G34700.1 - [+] show detail - Pollen Ole e 1 allergen and extensin family protein
        Distance: -2591; Region: intergenic
      • AT2G34710.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: 1105; Region: intergenic
    Flanking Genome Sequence: 54-3122-1 - 3-prime edge 
    CCCGTGTATA TGCATCGGGA ACAATACATT TCCTTCCCAT TTCACTAGAA 
    CTTTTGAAGG CACCACCAAG TTTCTGGATT TTGGAAAAAC CACTGATGAT 
    GGTATATTAC ATAAGGCAAC ATCAACTTTG TAGCCTCTTC CCTCCATGGC 
    TCTATCACCA TAAGAAAACT TTGAGGTCAT GTCTTTGGCT TGCACAATCC 
    ATTGACAATA GTATTACTAT ATATGAAGGA GCATTATTAA GCAATAGTAT 
    GTTATTGACT TGAATAGTTT GTTTATCTAT AAAATATATA ATAACAAAAA 
    TCAGAAGTGG AAACTATAAT ATCTAAACTA CTCTTCCGTT CCATTTTAAA 
    TGATATTTAA TCAGATGAGG AGGAGACCAA CAAGCACGGT GGCTATAATA 
    ATGTAACCAA TATTCTTCAT ATTGCTCTTC GAATT

AT2G34700.1

Model type
Protein coding
Short Description
Pollen Ole e 1 allergen and extensin family protein
Computational Description
Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 31 (TAIR:AT1G28290.1); Has 194 Blast hits to 194 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 194; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G34710.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary
Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA.
Computational Description
PHABULOSA (PHB); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT1G30490.1); Has 3393 Blast hits to 3288 proteins in 275 species: Archae - 0; Bacteria - 20; Metazoa - 905; Fungi - 114; Plants - 2320; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G34790.1

Model type
Protein coding
Short Description
FAD-binding Berberine family protein
Computational Description
MATERNAL EFFECT EMBRYO ARREST 23 (MEE23); FUNCTIONS IN: electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity; INVOLVED IN: polar nucleus fusion, embryo development ending in seed dormancy; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: FAD-binding, type 2 (InterPro:IPR016166), Berberine/berberine-like (InterPro:IPR012951), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: FAD-binding Berberine family protein (TAIR:AT1G30760.1); Has 4988 Blast hits to 4831 proteins in 776 species: Archae - 82; Bacteria - 2407; Metazoa - 5; Fungi - 1644; Plants - 646; Viruses - 0; Other Eukaryotes - 204 (source: NCBI BLink).
Link
InterPro Scan - TAIR