1. Home
  2. Mutant Lines
  3. 54-3146-1

54-3146-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18080370 [Map]; Strand: w
      • AT5G44790.1 - [+] show detail - copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting AT...
        Distance: -382; Region: promoter
    Flanking Genome Sequence: 54-3146-1 - 5-prime edge 
    TATGTAATTA AAGGAAATAT TAATAGTACT TTTTCAAGAG TTAACAAAAA 
    ATCTGGAAAT ATTAATAGAG TTTTAAAATA TCTAAAAAAA AACTAAAAAT 
    ATTAATAGAT TTTTAATGAA AAATCTAGAG CACTAGAGCT TTGGTCTATA 
    CTTTTTTCAT TAAATATTCT TAGAAACATG TTAAATGACA TTTGTTAATG 
    GTTTTTTTTA CAGCATTTGT TAATGATTTT GATTGGTCTT GTTGATTTTT 
    TAATTATTGC ATACAGTTGT TCAAAACGTG TATGTTAAAT AATTATTGTT 
    TGAAGTCGTC GTCTACTAAT TAATTTGATT CCAAAATTAA ACAACGTAGT 
    GTAGTCATAG ACGAAGGAAA AAAAATNCGA TAGTAGTANA CTAGTAGTAA 
    ATGTTTATGG GCNCATGGAT CTTTGNGTTT ATATAGGAAG TTACAGCTGT 
    NCTGTTTTTT CCACGGTAAT TTTATTATGG TTCAATGGAT GTAGCCTAGT 
    CTGATCCCGA GGAGTGGTAG ACTCGTGAGA CCTATTTATA TTTTTAAATA 
    GTAGTAGTAG NCAAATAAAT GCNCCCATTG TTTATAATTA ATTNATACTT 
    AAACGTTGAA AATGAGGAAA AAAATGCANT ANTNTNTGTT NGAAATCTAA 
    TTNCGATAAA TTTTCTAGTT TTNGATAGCA NGTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18080254 [Map]; Strand: w
      • AT5G44790.1 - [+] show detail - copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting AT...
        Distance: -266; Region: promoter
    Flanking Genome Sequence: 54-3146-1 - 3-prime edge 
    ATTACATACG TACATAGTAA TAATAGATTT CTCCTATAAA ATGCTTTTCT 
    TTTTTTACTT CAGCTCCTAT ATAAAATACT CGGATAAATA GATCCTAATC 
    AATAAATAAA TAGGTTCAGT TTTTCTTTTG ATTTAGTCGT GTACAATGAC 
    GATCACAACA AAAAAGCCCA TAAATATAAT TTACTCAAAG TGATTAAGGG 
    TAAAATTGTC ATTATCTGAT ACGTGTTTTA GTTGAAAAAT TGCTATCTTC 
    CACCTTCTTC TATCTCTCTA CGAAAATAAT ATTTTTGAGT TTTTTTTTTA 
    CTTTTNGTTT TTTTTTTAAA AANTTTTTTT NTTNAAAAAT NCCCCCNTNG 
    NTNTNCCNNA AGGGAAAAAA AAAGGGNNNT GGAAATTTNA AAANCCCCAN 
    NNNNNNTNTN GTNGAAAAAA AAAAAAAAAA ACCCTTCCNT TTNNTNTNCN 
    CNNATTTNCA NNCCTTCCGG GTNGCTNGGC GAAAAAAANG GGCCCCNANT 
    NANCGGGGAT TTANANGTTN NCNNGGGGNN CNGNGNGGNT NTNTNCCCCN 
    AANNNNGCGT NAGNGGAAAA AGGGGGCNTC TGNCNNTTCC TANAANANNG 
    NANANAGCGN GCGAGNNTAG ATTTCNNNCC TCNANNCGNN AAAAAGGGAC 
    ANANTTTTTN CCGGGGATTA AGNGNAAANA ACGGGCNGGG GNNCCNCNGN 
    NNNAANANCG GGNGGGGGCA GGGNNAAANC TC

AT5G44790.1

Model type
Protein coding
Short Description
copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1)
Curator Summary
ATP dependent copper transporter vital for ethylene response pathway
Computational Description
RESPONSIVE-TO-ANTAGONIST 1 (RAN1); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P type, cation/copper-transporter (InterPro:IPR006403), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), Heavy-metal-associated, conserved site (InterPro:IPR017969), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), Copper ion-binding (InterPro:IPR006122), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 5 (TAIR:AT1G63440.1); Has 47831 Blast hits to 34622 proteins in 3461 species: Archae - 1084; Bacteria - 31583; Metazoa - 5562; Fungi - 2713; Plants - 1975; Viruses - 3; Other Eukaryotes - 4911 (source: NCBI BLink).
Link
InterPro Scan - TAIR