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54-3159-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26501983 [Map]; Strand: c
      • AT5G66330.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: -28; Region: promoter
      • AT5G66340.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -519; Region: promoter
    Flanking Genome Sequence: 54-3159-1 - 5-prime edge 
    GAACCACACC TNACTGNACA GATGNNGCTG NCTTCACGCA TANGTCTGAG 
    CGGACAANGA CACACATGAT ATNAATGNNA CACTATCTAT TNTAATATCT 
    CAATCTNTCT ATATATAAAT TCCTCTGTCT TTNAAGTTTC AGAGCAACTT 
    TCAGTAGATC TATCACACGC CTTGACCCTC TCATCCAACG GTCATTATTC 
    ACTCCAAACC CACTCTGCTT CTTCTTCTTC CAAACATCTC TCAGCAGAGC 
    TAACCATCTC TCTTTTGTAA TGGCTTCACT TATTTCCCTT GTTCTTCTTC 
    TTTTGCTCAC TTTATCTTCA GCAGAGTCCA AGACTTTCTG GGGTGACGTG 
    GCAGCTCTCA AAGACTTCAA GAACTCAGTG GATGCCAAAT CCATGAGTCC 
    AGGCTCTTGC CTGAGTTCTT GGGATTTCTC CGTCGATCCC TGCGACAATA 
    TATTCAGCGA CACATTCACT TGTGGGTTCC GCTGCGACTC CGTCGTTACC 
    GGATCGGGTC GGGTCACGGA GCTCAGTCTG GACCAAGCCG GTTACTCAGG 
    CTCCCTCTCC TCCGTCTCTT TCAACCTTCC TTATCTCCAG ACCCTCGATC 
    TCTCCGGCAA CTACTTCTCC GGTCCACTTC CCGACTCGCT CTCCAATCTC 
    ACCCGTCTCA CCCGCCTCAC TGTGTCCGGA AACTCCTTTT CC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26502067 [Map]; Strand: c
      • AT5G66330.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: -112; Region: promoter
      • AT5G66340.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -435; Region: promoter
    Flanking Genome Sequence: 54-3159-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    NATCCACCAT ANCTCAGAGG TTATGAGTTT GAGATTCTGT TGAGATTCCA 
    AAGCANAACA ACTCTTGATT TAGGATTATT TGACATATTA CCAATTCACA 
    TGTCATAAAT TGACTAATAA ACTTTACAAT TTATTTCATT TTCTCCCATA 
    TGTGACGTAC CCATTTGACC AGAAGTTGTC AAAATCTAAA CTAGTCTTGG 
    TTGATGACAT AGATAGAAGA AGTAATTATA GCCTTACAGG AAGCAAGGTT 
    GATGGGTTAA TGAATGTGCA GCTGTTGCAA GCAAAGGTTC CAAATCATTG 
    GCTCTAACTA ACTTTAAATC TATGGAAGAC GACGAAAATG TTCATATATG 
    ATAGGATCAC TCATTAGCGT TAGGTGTCTA AAACTCTAAA CCTAAGCCAT 
    GTGGGACACT AAATCATCCT AACGGGTCAC TAAGACTATG CAGAGATTGG 
    TAAAACAAAA GGTACTAACA TAATCTATTG GCACCATCTG AATTTGTTGT 
    CGTCCTTGCT TTTCGTCGGT ATGTTGTTCT TAACGAATAA TTGTCTCACT 
    GTTTCTTTGT TAATCTTGAA CTCAAAGACC ATCCCTATAA TAGTTAGAAA 
    GATGCACAAT TACAAAGCAG AAACTAGTGC TTACATCGAT CACGATACTC 
    TCTTCTCTGA CCTTCTATTT TCCTCTAAGC TGTGATTTAT GCTTATCCAG 
    ATTACTATTG AAAT

AT5G66330.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Computational Description
Leucine-rich repeat (LRR) family protein; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat (LRR) family protein (TAIR:AT2G15320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66340.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR