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54-3160-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1073632 [Map]; Strand: w
      • AT4G02440.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 54-3160-1 - 5-prime edge 
    CTTGATAGCT CACTAGAGAG GACAGGTCTT TCATTCTTCT TCCACGGTCT 
    CAAGTCTCAA TCTTGTTTGA TGTATTTGTA GGAATAGTGT CATTGTGTTT 
    CAAATTCTGG TTAATGTTTA AGTAATGGTT GAAGAAAATT GGCTCAACAT 
    ATTGTGGTTG NNTTGATTNA ATGTTGACAA CATATTAGAC TTCGATTCNA 
    ATGCATAAAC TCTTACGTCA NAGCNAAAAA TTTCNAGTCC ANNAANANNN 
    GGAAANAANC TTNCCCAAAA CAAAAGGTAA ANGAAACNTN GGCCAAGATC 
    NCGTCNNNGG NAAGAAAACC NAGAACNAAC NNCCTTNNTA TAAAAAAAGA 
    NGGNNNNCCC CNNGGTTTNA TAAANGAGAA AAGCNAANAG GGGGNNTATA 
    NGCCCTCCNA ANCCTTNNNA NGANCNGAGN GGNTNNNTCA CCATNNCNNA 
    AAAAANAAAA TTNNNNTNGC TNNCCNAAAA AANANNNTTT TTNCNTTTGG 
    NGGCNNGTTT TTTTNNTGGA NNNNNNNACC TAAANAAAAA AAAACCCNCT 
    GGGGGGNNGG GGNGGGGGGG NGNNTNNGGN GNNNTNNNNA AAAAAGNTGA 
    NAAAAAAANA AAAAACCCCC TTTTTNTTGG NGCCCNNANN AAAAAAAATT 
    NNNATGGGGG TTTTNAAAAA AAAAAAAANG GNGCCCCNAA GGGGGNNTCT 
    NCNTNTNAAA AAAAAAAAAN NCGGGGAAAA GNCNTCCTNT CCTNGNNGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1073567 [Map]; Strand: w
      • AT4G02440.1 - [+] show detail - F-box family protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 54-3160-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCGT 
    GCTATCAAGT GTAGAGAGGT AAAGCAGTCC AAGCACCAGA GACATGACCA 
    TTCTCACAAA CATAAGCTCT CACAACTGGT TCACCATCAT CATGAAACCC 
    AAACACTCTT CTCAAACAAA ACGATGAATG CAAATCCCAA GTCTCATCGC 
    ACAAACAAAA CGCGCATTTC AAACCCGAGG TCTTACTCCG ATTACCGTCG 
    TTTATCGTTC TCCAAACTCT AGACCTTTTG AAATCCTTGA AGACTCCTCT 
    AAACAACATG TAATTTCGTT TCTCTTCTAC GTGAATACAC CCAGGCCAAT 
    TGCAAATGTA GAGACAATCA CCTCGGAATC TACTCGCGAG AAGCT

AT4G02440.1

Model type
Protein coding
Short Description
F-box family protein
Curator Summary
EID1 is an F-box protein that functions as a negative regulator in phytochrome A (phyA)-specific light signalling. Expressed at all stages of plant development independently of light conditions, localizes to the nucleus, and forms nuclear speckles under continuous far-red light. Forms stable dimeric and trimeric complexes with several ASK proteins and Cullin1 in yeast and in planta.
Computational Description
EMPFINDLICHER IM DUNKELROTEN LICHT 1 (EID1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: photoperiodism, flowering, red, far-red light phototransduction, leaf development, regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 91 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR