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54-3162-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11528447 [Map]; Strand: c
      • AT1G32050.1 - [+] show detail - SCAMP family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-3162-1 - 5-prime edge 
    CGAGGAGAGC ACCGACTCCA CTGTGAAAGC AAACTGATAT GGTTGGACTC 
    TCTTTTTCTT CTTTTTCTCT CCCACACGAA ACGCGGAATT TGGAACTATT 
    GGTATTTTGA CGAAACTAAC CCTAAGAAGT ATATGGGCCG TTTTGGTTAT 
    TTGTTTCGGG CTTTAAAGTA GGCCCGACTC ATTCTTTTAT TATATACACG 
    ATTAGGGTTC GAAAACTTAG AAAGAAAAAA CACATGATTT TATGCTATAA 
    ATTACTACTA ATACATTAAC ATGATGCTCG GAATCTCAAG CTACGTGTAA 
    ACTACTATAC TTGAGAGATC TGGTCCGTAA GATTTGCGTC CCCTGGACGC 
    TTAATCTCCA CCATGCAAAT GACCTCTACT AAAAAGACAT ACATAACAGC 
    AAAGAACCAA ACAAGCCATA GAGGGGCAAC GATGAGAGTG AAGATGGGAG 
    AAACAATGGA GATGAGCATG AGAGCTGCAA GAGCCCCAAA GAGATGGCTG 
    ATGTGTCCAA CGAAGTGGTG GATCGGAGCT TGGTTACTAT TGAGCTTTAT 
    TTCAGTGACT CGGAGGACGA CGTAGATCAG AATAAAGACA CAGAAAGAGA 
    GGATAGTGGC TTGACGATCT GCAGTATTGA TTGAAGCTGA GGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11528487 [Map]; Strand: c
      • AT1G32050.1 - [+] show detail - SCAMP family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-3162-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAC 
    TGCTCTCTCT TTTTTTCTTC TCTCTTTCTT TTCACCTCTC GCCGGATCTC 
    GGCGATCTTA TAGGAGACAA ATCTATCAGT ATCGTTATTC TAGGATCTCT 
    GACCAACAAT GAATCGCCAC CACGATCCCA ATCCTTTCGA TGAGGACGAA 
    GAAATCGTCA ATCCTTTTTC GGTAACGCTT TCTCTTTCTT CTTCTTCTTC 
    TTCTTCTTCT CCCTGAATCT TCGATTTTTG TTTTTTTTCC TCTATTTTTT 
    TTTATNGCCT GNGTTCGCGA CGGTAGNGGA ATCTANATCT CTCACTTGTN 
    GAGTTTTTAT TTAGTTTTGN GCAAATGGAA AATAGCANAA ACTGAGGACT 
    GANAACTGNG TAATGTCATT TTGATTACGG AAGGTTCATT TNTATTTGAA 
    AATGATATTA ACAGNGTTGA NATTATGGAT CTCTCGATGT TTCTTCGGGA 
    TACTGAACTT ATATCTGNGG ATCNGGAANC TNGGNNAAAA ACNTNCNAAA 
    AANGGAATAG TGTTTGNGAG TAATTTCTTC CAATTTGGAG GGGGACTCAT 
    TCCTTTAGTT TTGGAGAATC AAACTCATTG NTGATNGATT CTTTNGGGTN 
    ATNGGNGCTT GACGTNGATA GTTTTTNGAA TTTTANNAAC TTTNGATAAA 
    TTTTGCAAAA AGGGGGNGGA AGGGGTCCTG CTGCNTNTAG GCCANNNGAA 
    NNTGGNCAAA NC

AT1G32050.1

Model type
Protein coding
Short Description
SCAMP family protein
Computational Description
SCAMP family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: SCAMP (InterPro:IPR007273); BEST Arabidopsis thaliana protein match is: secretory carrier 3 (TAIR:AT1G61250.1); Has 679 Blast hits to 677 proteins in 107 species: Archae - 0; Bacteria - 0; Metazoa - 375; Fungi - 14; Plants - 225; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Link
InterPro Scan - TAIR