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Mutant Lines
54-3190-1

54-3190-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 16694259 [Map]; Strand: w
  - AT5G41750.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon1 (CDS)
  - AT5G41750.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-3190-1 - 5-prime edge
```
CTTTATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCCG TTGTGCTCTC GAAGAAGTAC GCTTCTTCCA 
GCTGGTGTTT AGATGAACTT GTGGAAATCT TGAAGTGCAA AGAAGCT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 16694252 [Map]; Strand: w
- AT5G41750.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon1 (CDS)
- AT5G41750.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon1 (CDS)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAGA 
TCGAGACTCT AGCTTCTCTA ATCCCTTGTA TGAGCTCAGG TCCGATCGTC 
TGGCCTCTCT CGATCTTCTG ATCATTGAAA GTCGTGATAC CTTTGCTTGC 
AAAGACACTG TGTAAATGAC TGAGAAACCC TTTACGGACA TCTGGACCGT 
GGAAGCTCGA AAAGACTTGG TATCTCTTGA TGCAAGACAA AGAAGAAGAC 
AAAGCCATGA GAGATCACAA ATGCTTGAAC TTGAAGAAAG TATTCTTAGA 
CTGGTATTGA AGAAAGTATG ATTTGAAAAG CAAGCTCCGA TTCTTTGGAT 
TATTTATTGA AGCAAAAACG CGTAAAATGA GAAGAGAAGT TTCGAAGAAA 
TTGGAATGTA ACTGGAACTG AAAAAATACG AAAAGGAGAA GAGAAATTTC 
GACGACTCTG TGTTTTGTTA TAGTCGTCGA GGACCAATGA CTATTTTCGT 
ACATATTATT ATTGAATATT TGGTTTGAAA AGGAGAATAT TTGTATTAAG 
TTAATTAACA ATAATATCGA ATTGACCATT TGAACATCAA GAATGAAGAA 
CCAAACTTTC TTTGCAAACG TTGAAATTTG ATATTTACCT ATTCGACAAG 
AAACTAAATT CTGCTTTTGG GAATGACAAG CT

AT5G41750.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41750.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR