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Mutant Lines
54-3191-1

54-3191-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26447166 [Map]; Strand: w
- AT5G66160.1 - [+] show detail - receptor homology region transmembrane domain ring H2 motif protein 1
  Distance: 0; Region: exon5 (3UTR)
- AT5G66160.2 - [+] show detail - receptor homology region transmembrane domain ring H2 motif protein 1
  Distance: 0; Region: exon4 (3UTR)
- AT5G66170.3 - [+] show detail - sulfurtransferase 18
  Distance: -476; Region: promoter
- AT5G66170.1 - [+] show detail - sulfurtransferase 18
  Distance: -482; Region: promoter
- AT5G66170.2 - [+] show detail - sulfurtransferase 18
  Distance: -482; Region: promoter

CTCTGAGTCA TGTGTACATT TGATCATTGT GTGTGTGTGT GTGTTATAGA 
TTGAAAAAAT GTGTGTGATA GNACAGATAT GCANACAAAT TGATAGAAAA 
CAAATGTTGG TCTAATCAGA TTTTCTCTCT CCGATCCAGG CAAATCTCTA 
ATGTTATCTT GTTGATAATT TNTTTGCCTA AAGTTTGTAT AATATGAATA 
TTGAATCTGA TTCCCTTACA TGGGGGAATG GAATCCATTG AACGTGGCTT 
TGATTTTGTC TTGTCTGTNG TAATAATAAG AAAAGAACAC GTCATCCTCA 
TCTCTACCTA ACGACTCATC CAATACGATG ACTCGTTCAT GGGTNTGTTA 
GTTGCGCAAT TCCATCACCA AAACTTTCTA TTACATACTC AACTTCTTTT 
GATTACTAAA TTCAGCCAAC ATTTCCTTCT CATCTCTAAT CAGTGAACAC 
GTTTTCTATG CAGGCTTTGG GGCCTATCTT ACCATANCTG TCTAAGAAGA 
CTATTATCTT ATATTCTTTA TTGNAGATTT CATTTACTNG CGTATGGAAT 
TGGANACAAA TGTCTAATTG NTGAATCATA TACCATTATT TTTATATTGG 
CCNNGCNTGT GTATAAGTGG AAGATAGAAC AANTNTTAAA ACAATATTAT 
TGGTGTTGGG GCCCTATTTA TTACTCTNTG CCNCTCTTTC NCNGAAANTA 
NAANAG

3 prime edge [+] show sequence

Chromosome: 5; Position: 26447050 [Map]; Strand: w
- AT5G66160.1 - [+] show detail - receptor homology region transmembrane domain ring H2 motif protein 1
  Distance: 0; Region: exon5 (3UTR)
- AT5G66160.2 - [+] show detail - receptor homology region transmembrane domain ring H2 motif protein 1
  Distance: 0; Region: exon4 (3UTR)
- AT5G66170.3 - [+] show detail - sulfurtransferase 18
  Distance: -592; Region: promoter
- AT5G66170.1 - [+] show detail - sulfurtransferase 18
  Distance: -598; Region: promoter
- AT5G66170.2 - [+] show detail - sulfurtransferase 18
  Distance: -598; Region: promoter

ACTCAGAGCG TATGTAAATG TACACATGCA AAGAAAAAGA GGCAAAGCAA 
CTCAGATCTT TTTGATCTGG GAATCCAGCA AAGCACGACC AGTATGGCAG 
ATCCGGTCCC TTTACCTAAA CTTATCCCAC CATGATTAAC CATTCAATAT 
AAGATGCAAA CCTGGACCTG ATCCAGGTAA CCGAGCACTG ATATGAGTGT 
TCAGCTGCTA AGCCGATAAT AACTCTAACG GCTTTGACTG GATTGGGCAA 
AGGCAAATCT ACTCGTACTT GTATCTGTTC TCGGACTCTC TCGTTTATGT 
ACCTGCAACA AAACAACACA AACAGTGTAT TGAACCCAAC GCAAAAACAA 
CAAAATAACT ACTGAAAGGA TTTATACATT TCAGTCTAAC AGGATCACCT 
CAGAAGACAT AGTCTCGGTT CTTATGTCAT GCTTGCACAC AGGGCAAGAT 
GTACCCCATT TTGTCAACCA AGAGTCGATG CAATTCAAGT GAAAAGCTGC 
ATAAGAGCTT CAAATCAACC AACTGCTATG AATTACCCCC ACTTACATAA 
ACTAAAAAAG GTCAAATCTT TAATTTATTC TTCTGATGTA CATATTCGAC 
CCATCATATC ATTCGAAGCA ATGAGTAATA CCAAAAAGTT CGCATTCGGT 
GCTTACCTAT CAAACTGGAA TTGACAGAAA CGGAATATAT TGTCCTTTCA 
ANCCCTAAAA CAGANGAATT TATG

AT5G66160.1

Model type: Protein coding
Short Description: receptor homology region transmembrane domain ring H2 motif protein 1
Curator Summary: Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles.
Computational Description: receptor homology region transmembrane domain ring H2 motif protein 1 (RMR1); FUNCTIONS IN: peptidase activity, zinc ion binding; INVOLVED IN: intracellular protein transport; LOCATED IN: extrinsic to vacuolar membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Protease-associated (PA) RING/U-box zinc finger family protein (TAIR:AT1G71980.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66160.2

Model type: Protein coding
Short Description: receptor homology region transmembrane domain ring H2 motif protein 1
Curator Summary: Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles.
Computational Description: receptor homology region transmembrane domain ring H2 motif protein 1 (RMR1); FUNCTIONS IN: peptidase activity, zinc ion binding; INVOLVED IN: intracellular protein transport; LOCATED IN: extrinsic to vacuolar membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Protease-associated (PA) RING/U-box zinc finger family protein (TAIR:AT1G71980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66170.1

Model type: Protein coding
Short Description: sulfurtransferase 18
Curator Summary: Encodes a thiosulfate sulfurtransferase/rhodanese.
Computational Description: sulfurtransferase 18 (STR18); CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G17850.1); Has 200 Blast hits to 200 proteins in 47 species: Archae - 2; Bacteria - 43; Metazoa - 0; Fungi - 0; Plants - 144; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66170.2

Model type: Protein coding
Short Description: sulfurtransferase 18
Curator Summary: Encodes a thiosulfate sulfurtransferase/rhodanese.
Computational Description: sulfurtransferase 18 (STR18); CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G17850.1); Has 1280 Blast hits to 1276 proteins in 450 species: Archae - 27; Bacteria - 889; Metazoa - 24; Fungi - 9; Plants - 170; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66170.3

Model type: Protein coding
Short Description: sulfurtransferase 18
Curator Summary: Encodes a thiosulfate sulfurtransferase/rhodanese.
Computational Description: sulfurtransferase 18 (STR18); FUNCTIONS IN: thiosulfate sulfurtransferase activity; INVOLVED IN: aging; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G17850.1).
Link: InterPro Scan - TAIR