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54-3194-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8977026 [Map]; Strand: c
      • AT1G25550.1 - [+] show detail - myb-like transcription factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-3194-1 - 5-prime edge 
    CTTTNTANAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATTT CATCAGATGA AGCAGAACTC CACTTGATTG 
    GCATAAACTC TTCAAACACG GCACCGCCGC ATTCACTAGT TGTCCGCTCA 
    GAACATTCTG ACTGGCCGCC AACATGTTCT GAAGATTCCG ATAACTCCTT 
    CCGACATGAC TCGATAGCTA CAAGAATGAT ATGTAAACAA TTAAGAAACT 
    GGAAGCGATC GTGAAAACGA AGAATATATA TATCAAAAGA GGATGTGTAA 
    TAACATTACC TTGGGTTACA AGTTCTAAAC ATAAAGGGAG CTCACGTTGA 
    AAGACTTGAA TCTTTTTTTG TTCTTCTTCT AGAGCTTCTA CATATTCGTG 
    ACATCTCTTC ATTTTCTGGG TGTAATCCAT GTCACCGCTC TTGAACATCA 
    TCATTATGAA CAGATCTTAG ACTCGTTTTT GCTATGAGTT ACAGTTACGA 
    AAACATAAAT CTTGAGAGAG ACAGAGAAGA GTTTTGGATC TAAAATGAGA 
    GAGAAAGGAT AAAACTTTGA CGTTTTTAAG TTGGAAGTTT TAAAGGGCAG 
    AGAAAGAGGA TTGGTGTCTA ATCGAGGTCG GGCCGTCGCG TACCTAAAAC 
    CGAATCTTCT TGATGTTTAG ATTTATTCGG ATTTTACTTG GGAAAGGGTA 
    GAATGGTAAA TATAGGAATA GGCTGAGGTT TGTTTGATAC AGGGAGAATA 
    TTCGGGGATA TGTGGGATTC CTTCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8977031 [Map]; Strand: c
      • AT1G25550.1 - [+] show detail - myb-like transcription factor family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-3194-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCTA 
    AACCGATAAA GATGAAGAAG CTGAGAAAAC TGAGATGATG ACCAATGAAA 
    ATAACGATGG TGATAAGAAG AAATCGGATT GGCTTAGATC TGTTCAATTA 
    TGGAACCAAT CACCAGATCC ACAACCTAAT AATAAGAAAC CGATGGTAAT 
    TGAAGTCAAA CGCAGCGCTG GTGCGTTTCA ACCGTTTCAA AAGGAGAAAC 
    CTAAGGCTGC AGATTCTCAA CCACTTATTA AAGCAATTAC TCCGACGTCG 
    ACGACGACAA CTAGTTCCAC GGCGGAAACC GTCGGGGGTG GAAAAGAGTT 
    TGAGGAGCAG AAACAATCTC ATTCGAATAG GAAGCAAAGA CGTTGCTGGT 
    CACCGGAGTT ACACCGCAGA TTCTTGCACG CGCTTCAACA ACTTGGTGGA 
    TCACATGGTA AATATATTAA ATCCTTTGAT TGTTTGAGAA TCATAATTTT 
    ACGAGAAGTA TATATTTAAT TTTTGTTCAT TGTCAAATAT GCAGTTGCTA 
    CGCCTAAGCA GATTAGAGAT CTTATGAAGG TCGATGGTTT AACTAATGAC 
    GAAGTTAAAA GTCATTTACA GGTAACAAAA CATAATCATT TTATGGTTCT 
    CACTACAACA TAGATTCATA GTTCTATAAT TTTTATCAAC TTTCTTGATT 
    TTTATAGAAA TATAGATTGC ATACAAGAAG ACCAGCTACT CCGGTAGTAA 
    GGACCGGTGG TGAAAATCCA CAACAC

AT1G25550.1

Model type
Protein coding
Short Description
myb-like transcription factor family protein
Computational Description
myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT1G68670.1); Has 1641 Blast hits to 1637 proteins in 65 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 1615; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR