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54-3231-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 13103235 [Map]; Strand: c
      • AT3G32110.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 54-3231-1 - 5-prime edge 
    GCTACACCGC CATTTCCAAC CCCACCAAAC CGCCATAGCA AACATCGTCG 
    ACCAGTCACT ACCCTCTGCC ATAATACCTT GCCTTAGATT CGAGTAGAGC 
    CACTCCAATA AGGACATAGT GAAGAACGAC TGCTGCAATC TCCTTGGTAC 
    AATACGATCC CATATGCCCG ACATAGCGGG ACAATCCCTA AGAACATGTA 
    TGATTGATTC TATGCCTCCT CGACAAACTT GACAAACATC AGAATTACAC 
    AAATGCCTTC TCTTACGCTC GGAGTTCGTC ATAATTGCTT GGTTCACTAT 
    CAACCAAAGA AAAACCCGTA CCCGTTCCGG TGCCTGGAAT TTCCACACAC 
    GCCCATATAA ACTACTCATA TCCTGCCTCG GAGAATCTTC ATTAGTCAAC 
    AATGCAACTG CTGATTTGAC TGTGAAACGC CCATTTGAAG TCATTCCCCA 
    AGCTAAACGA TCATGTGCAC CTGTGACACT ATCTACTATC ACAGCCAATA 
    GATCAAGACG CTTATTTTCA GTCACAAAAG GTGCTATTTG TGACATGTCC 
    CAGCCTGTCC CATCTCTCCA TAAGTCTCGG GCCGTACACA ATAGAGTCAT 
    CAGCAATAGG CGTTTCAGAC AACCACCTAT CCGTCCAGAA CCTGATCTGT 
    CTCCCATCTN CAATTACCCA GTGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 13103351 [Map]; Strand: c
      • AT3G32110.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 54-3231-1 - 3-prime edge 
    GGTGTAGCAA TATTTTTGGG GAGAATAAAA CATGCCGTGA TCGGGTGCGC 
    TTCATAAAAG ACCTAGCTGC GGAGGTGTCG CTAGCTTACT CGCGGGTAGT 
    CGAGCTCAGG CCGTCGGGGT TAAGAGTGAA CAAACCGATA CGTTGGACAC 
    CTCCTATGGA GGGATGGTAC AAGATCAATA CAGATGGAGC TTCACGTGGG 
    AACCCGGGGT TAGCTTCAGC CGGAGGTGTG TTGAGGAACA GTGCGGGTGC 
    ATGGTGTGGA GGCTTTGCGG TTAACATTGG GCGGTGTTCA GCACCGCTAG 
    CAGAACTGTG GGGTGTGTAT TATGGGTTGT ATATGGCTTG GGCTAAACAA 
    CTTACACCCT TGGAGCTGGA AGTGGATTCG GAGGTGGTGG TAGGTTTCCT 
    CAAGACAGGG ATAGGTGAGA CTCATCCCTT GTCTTTCCTT GGTACGTTTG 
    TGCCACGGCT TTTTATCAAA GGACTGGACA GTCCGTATAT CTCACGTATA 
    TCGGGAAGCT AATAGTCTTG CAGACGGTTT AGCTAACCAT GCGTTTTCTT 
    TGTCGTTGGG TCTTCATGTT TTTGATGAGA TCCCGATCTC TCTTGTTATG 
    CTTTTGAGCG AGGATAATGA CGGGCCTGCG CGCCTAAGAC GAGTTCGTTT 
    GTAATTTTTC TGTTTTTTTT TTAATAAATT CCCGGGGTTT TTTCCCCGGN 
    GATTNACCAA N

AT3G32110.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.9e-52 P-value blast match to GB:AAA39398 ORF2 (Mus musculus) (LINE-element)
Link
InterPro Scan - TAIR