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54-3243-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5125030 [Map]; Strand: c
      • AT3G15210.1 - [+] show detail - ethylene responsive element binding factor 4
        Distance: 2468; Region: intergenic
      • AT3G15220.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 1567; Region: intergenic
    Flanking Genome Sequence: 54-3243-1 - 3-prime edge 
    ATTAAAAGCT CACAGGAAAT TAACTACAGA TCCATTACGC ACCGCTTCAA 
    TATTAGTTTC AAAAGTAACA TCATTCACCG GCATTTCATT AATTGGAGAA 
    GATATTTTTC TCCTTGAGTA AATTTATTAC TCGAGTACAA CACGCATAAA 
    CTAATTCAAT AAGATGGTTT TTGTATTAGA TCAGTTTTCA ATCGAATTTT 
    CTTTTAACTA TAAATAATGA TTAGTAACAT TTATCAATCC TAAGTTTCTA 
    AGACTACGAG AGCTTCATAA AATTTTGCAC TAACAAAAAT TGAATT

AT3G15210.1

Model type
Protein coding
Short Description
ethylene responsive element binding factor 4
Curator Summary
Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation.
Computational Description
ethylene responsive element binding factor 4 (ERF4); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene response factor 8 (TAIR:AT1G53170.1); Has 6170 Blast hits to 5786 proteins in 253 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6156; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G15220.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytoplasm, spindle; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G53165.2); Has 133641 Blast hits to 131568 proteins in 4406 species: Archae - 196; Bacteria - 15456; Metazoa - 49688; Fungi - 12950; Plants - 32844; Viruses - 666; Other Eukaryotes - 21841 (source: NCBI BLink).
Link
InterPro Scan - TAIR