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54-3247-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 277533 [Map]; Strand: w
      • AT5G01730.1 - [+] show detail - SCAR family protein 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3247-1 - 5-prime edge 
    CTTCGAGCAA AGCTTCAGGA TCCTCCTTAT CGGCGGATTG GTAGAGCTCC 
    TTATCCGCTA AGCCGTACTC GTTCCGTATC TGGTATCTCG TCAATGCCAT 
    TGTGCTCCAA TCGATTAAAG TAGAAACCCT TAATTCTTAA AAACAAAAAA 
    AGAGCATCAG AAGAAGAAAC TGTGCAGAAC GAACCGCCAA AACGCGTCAG 
    GAGAAAGATG AAATCTTTTA CCTTTATAGA TTTTTAATTA ATTTTAACGA 
    CGCGAGAGTG GTGGAATTTA TATAACGGTC CGTGACATTC ATCCAACGGT 
    TATAATCATC GCCTCACCGT GTGGTTGCCG CATGTGATCA GAACCTCAGG 
    TAAAATAATT TATTCAACCG GTGAACATGA AAGTAGTTAA AACCGTTGAT 
    TATCCATGCT TAAAGATGGA CAAACTTTGC TTAGAATCAT AAGGTATTAT 
    AATTATTGCA AATCAATTAT ATTGTACTAC AAGTATATTG TCTACAAGTG 
    GTTGTGGTTG AAATCAGTTA GTGTATTCAA CCTGCTTTTG ATCGTTACAT 
    CCACCTTCAC CTAAGTTTTT TATTTTAATT ATAATTCTTT TTTTATATTA 
    TTGACTACCA ATAGTGATCA AAATAGTGGG AATTATATAT ATATTTCTCG 
    TCGATTTATT AGCATAGAAT ACATTCTTCT ATTCAATTCT TCGGATGTCT 
    TTAAATTTAT TTGAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 277417 [Map]; Strand: w
      • AT5G01730.1 - [+] show detail - SCAR family protein 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3247-1 - 3-prime edge 
    GCTCGAAGCT GCTTCCATGG CTGGTCTCGT CGGCGTTTTG CGCCAGCTTG 
    GCGACCTCTC TGAGTATGTT TTTTTTTTTT TTTTTTTAAA AAAAATTGGG 
    NCCNAANNNC CCCCCCNNNN GNNNAANTTT NTTNNNAAAA ANGGGNCNCN 
    CNNNGGGNCC CGGGAAANAA ANTTNAANNC TTNNNNCCNT NAANTNAAAA 
    AAAACCCNAA NTTNGGGGGG GNNTTTTTTT TTTTNNTNAA AAAATTTNTT 
    NGGGGGNNNN AAAATTTTTT NGGGGNNNAA AAAAAAAANT TTTTTTTTTN 
    GGGNNNNAAA NTTNAAAAAA ANCCNTTTNN NNNTTNGNAA AAAANCCCNN 
    GGGANTNNNN NTTTTTTGGC NTTTTTAAAA AAAAAAANGG GNGGGGGGGG 
    GGGNTTNCNT TNNCCGGGNN AANNANAAAA NAAAANNNNC CCNNANNGGT 
    TTNGNTTGGG AAANCNTTNN NAANNCCNNA AAAAAAAANT NCNTTTAANG 
    NAAAAACCCA TTTTTTTTNA AAANNAANNT TTTNANTTTT TTTTTANACC 
    NGGGNCNGNN NTTNTTTTAN CNTAAGGGGN AAAAAAAAAA AAANAAANGG 
    NTTTTGGGGG NCCCCANCCC CCAATTTTTT TTTNNGGCCN CACGCCTGGA 
    AAGGGNNTTN NATTCCNAAA NAAAAAAAAA ATTTTTTTNC CCCCGGAAAT 
    TNCCCCCNGN NANAAAGGGA TNCNCANAG

AT5G01730.1

Model type
Protein coding
Short Description
SCAR family protein 4
Curator Summary
Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.
Computational Description
SCAR family protein 4 (SCAR4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: positive regulation of actin nucleation; LOCATED IN: SCAR complex, chloroplast, plastoglobule; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: SCAR homolog 2 (TAIR:AT2G38440.1); Has 1330 Blast hits to 874 proteins in 188 species: Archae - 2; Bacteria - 349; Metazoa - 454; Fungi - 169; Plants - 213; Viruses - 0; Other Eukaryotes - 143 (source: NCBI BLink).
Link
InterPro Scan - TAIR