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54-3314-1

54-3314-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 1333949 [Map]; Strand: c
  - AT1G04750.1 - [+] show detail - vesicle-associated membrane protein 721
    Distance: -382; Region: promoter
  - AT1G04750.2 - [+] show detail - vesicle-associated membrane protein 721
    Distance: -415; Region: promoter
  - AT1G04760.1 - [+] show detail - vesicle-associated membrane protein 726
    Distance: -811; Region: promoter
Flanking Genome Sequence: 54-3314-1 - 5-prime edge
```
GGGNAAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATTTG CTCCCCCCGT CCATTAAGAA TTAAGAAATT 
TGGTTAATTA CAACATTTGT TTTTATGTTT AAGCCTTTTG TTCGTAACTG 
AGCTAATACT GGAATCACTG ATCAATGATG AATTTGGAAA AAAAGATATT 
TTGAGGAAGA CAGAGACAGA CTCTCTTCGA CCATGGGACC TGAACTTGTC 
CTAAAGTTGG TAATTACTAA TTTGTGCCAT CGGCAGAGTC CACGAGCTTT 
TTGGCTGGAT C
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 1333955 [Map]; Strand: c
- AT1G04750.1 - [+] show detail - vesicle-associated membrane protein 721
  Distance: -388; Region: promoter
- AT1G04750.2 - [+] show detail - vesicle-associated membrane protein 721
  Distance: -421; Region: promoter
- AT1G04760.1 - [+] show detail - vesicle-associated membrane protein 726
  Distance: -805; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTCCGACCGT TTTCATAGCT 
CATAGTCATA GTATCTTGTT ACAGCAACAA AATTCGAACT TCTACCGTTA 
TCTCTTGTCA TCTACAATTG CTCTGCATTG TTTAGAACCT GCTAATTAAT 
TTGTTTAACG TGTTCCTAAA GATTTTGATC AACAATCAAA TAATTGAAAT 
TTAAGGTAGG TTAGGGTTGN GGGGTTTNGG NNNAANATTA NAAGGGTAGT 
GAATGGGAAT GGAAAANAAA ANGGTTTTGN CCAANNATTA TTTTTTAAAA 
TTTTTTTTGG GGGANGGAAA GGGNTTTNGC CNNACCANTT TTTTCAATTT 
GGGNNCCGNT TNNNTTTTNN AGGGTNACCN NTTNNACCCC TTTTTNTTTT 
TTTTTTTTNG NAAAAANTTT TTAACNCNCC CCCCCAAAAN NTTTCCCNTT 
NTCACCNNNN NNNAAATTTT TTTTTTTTTT TTNAAAAAAA AACCCCCCCT 
TTNNTNAAAN NNNCNNCCCT NCTTANNNAA ANNGGGGGGG GNTTAAAAAA 
AAAGGGNCNC CNNNGGAAAN AANNCNTCCC CCCCCCNTTN NNGGGAGNGG 
NAAAAAAAAN CCCCCCCCCC CCGGGGGGGG GGGNGAANAN ACCNNAANNA 
ANACNCCNTT TTTTTTTTTT NNNNGNNGGG GGGTTTTTTN TTCCCNNNAN 
AAAAAATTTT TTTTTTTNGG GGGGNGGNNT TNTCCCCNNN NANNAANAAA 
ANANAAANAA ATTTTTTTTT

AT1G04750.1

Model type: Protein coding
Short Description: vesicle-associated membrane protein 721
Curator Summary: vesicle-associated membrane protein 7B (At VAMP7B) mRNA,
Computational Description: vesicle-associated membrane protein 721 (VAMP721); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: synaptobrevin-related protein 1 (TAIR:AT2G33120.1); Has 2472 Blast hits to 2471 proteins in 261 species: Archae - 0; Bacteria - 0; Metazoa - 997; Fungi - 453; Plants - 611; Viruses - 0; Other Eukaryotes - 411 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04750.2

Model type: Protein coding
Short Description: vesicle-associated membrane protein 721
Curator Summary: vesicle-associated membrane protein 7B (At VAMP7B) mRNA,
Computational Description: vesicle-associated membrane protein 721 (VAMP721); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: synaptobrevin-related protein 1 (TAIR:AT2G33120.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04760.1

Model type: Protein coding
Short Description: vesicle-associated membrane protein 726
Curator Summary: member of Synaptobrevin -like protein family
Computational Description: vesicle-associated membrane protein 726 (VAMP726); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport, vesicle-mediated transport; LOCATED IN: endosome, plasma membrane, chloroplast, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 725 (TAIR:AT2G32670.1); Has 2469 Blast hits to 2468 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 990; Fungi - 448; Plants - 610; Viruses - 0; Other Eukaryotes - 421 (source: NCBI BLink).
Link: InterPro Scan - TAIR