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54-3327-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26455623 [Map]; Strand: w
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-3327-1 - 5-prime edge
    GGTCAGACAG TTGAATCGGC TTCGCTAGGA TTTGCTTGAC GATGTCTGCC 
    ATCGTCGATA TCAGATCAAA TGGCGAATCG AGATTCAGAA ACCCGAAAGA
    GAAAGGACTA AACTTTGAGG AATTAGGGTA AAAAGGATAA AGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26455507 [Map]; Strand: w
      • AT5G66200.1 - [+] show detail - armadillo repeat only 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3327-1 - 3-prime edge
    GTCTGACCAG GTGGTCAAAG CCGCCGATGA GGCTAGTTCC TTCAAGCAAG 
    AGTGCGGCGA ACTCAAGGCT AAGACCGAGA AGCTCGCCGG TCTTCTCCGT
    CAGGCTGCCC GCGCCAGCAA CGACCTTTAC GAGCGACCCA CTCGCCGTAT
    CATCGACGAC ACGGAGCAGA TGCTTGAGAA GGCTCTCTCC CTTGTCTTAA
    AGTGCCGAGC CAATGGCCTC ATGAAGCGAG TTTTCACCAT CATCCCCGCC
    GCCGCGTTCC GGAAGATGTC TGGTCAGTTG GAGAACTCTA TCGGAGACGT
    TTCCTGGCTC CTCCGTGTCT CCGCTCCGGC GGAAGACCGT GGTGACGCTG
    GCTACCTTGG TCTTCCACCA ATCGCCGCCA ACGAACCCAT CCTTTGCCTG
    ATCTGGGAGC AGATTGCCAT TCTCTACACC GGATCGCTTG AAGACCGCTC
    CGATGCCGCC GCCTCGCTGG TATCTCTGGC CCGTGACAAC GATCGCTACA
    CGAAGCT

AT5G66200.1

Model type
Protein coding
Short Description
armadillo repeat only 2
Curator Summary
Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.
Computational Description
armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR