1. Home
  2. Mutant Lines
  3. 54-3353-1

54-3353-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4482303 [Map]; Strand: c
      • AT5G13900.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -414; Region: promoter
    Flanking Genome Sequence: 54-3353-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC CTATCATTTG TATCTTGATT AATGAAAACA 
    AGAAACTGCT CTTGTGTTAC TTTCAAATAC ATATTTAATA TATATGGGCC 
    TTGGACATCA AAAGCCCATT ATTCGATGGG TTATTAGTTG GCATGACATA 
    CNTTTGTATA GCCCAAACCT CTGTGTGTTT TTCTTATGGT TGAACGAGAA 
    CTATATTCTA GGATGGAATA ACAATTTGTT ATTCTACTTC TGTGGTTTTG 
    GTATTTGCTT ACGTAATGTA AATTATTTCA TATTTGATGG GTTCTTCTGG 
    TAACTTACCT GTTGAGGATG GTCAAACGAT GGTAGTAGGT TTGACTGGTG 
    AACCATGTCT ACCTATCTTA AAAGCTGGTC ACCAAACATA AAAATTAAAC 
    AAGTACAAAA GTGTTTTAGT AACACCCAAA ATAGTAAACT AAGGTGATAT 
    GATGATGGGG ATGAAGTTTT TCTCTTTTTA CGTTGTACTT CTTCTAGTTG 
    CAGCTAGCTC GGGGATGCGG ATAAATGGGC AGAGCGTTTC GTGTCTAAAC 
    CAACTTGCTC CATGCCTAAA TTACCTGAAT GGGACCAAGG AAGTACCTCA 
    AGTTTGTTGT AATCCTCTCA AATCAGTGAT AAGGAACAAT CCAGAGTGCT 
    TGTGCCGTAT GATTAGTAAC CGTGGGAGTT CTCAAGCCGA GC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4482310 [Map]; Strand: c
      • AT5G13900.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: -421; Region: promoter
    Flanking Genome Sequence: 54-3353-1 - 3-prime edge 
    GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATTAGTT 
    GTTATTGAAA AACTAATGAC AAACAGTCAC TTTGATCACA TAGGCAGAGA 
    TCAAGGACGG CGAAACATAG ATAAACCCAA AAAAGAAGAA GAAGGAAAAG 
    GTACAAATGA GGAAGGTATT AAATATGGAC GATGAGAAAG AATTAGGAGC 
    CAAAGTAGTT GAAACCTTGA GGGAAAGAGT CAGAAACCGG AGGCATTCTG 
    CTGAACATTG GACTATGTAC GTACTCAGAC GAGTAGTCGT CACCGGTCCA 
    GGTCCACTGT GGTTGGCTAT AACACGAATT

AT5G13900.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR