1. Home
  2. Mutant Lines
  3. 54-3362-1

54-3362-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 108167 [Map]; Strand: w
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: intron1 (CDS)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-3362-1 - 5-prime edge 
    CTCTCTGCGC CTCCTGGTCC TGCCACCAAA AACACAAACA ATCATCACAG 
    TCAACTAAAC CTTCTTCTAA TTGGATCTAA ACAAACAATT CATGGCTCTC 
    TAAGAAATAC TACTTGAGGG TTAGGGCTTG ACATCTCCGG TTTGGATGAT 
    AGTAACAACG GAATGCAATT CATTCTATCG GATGAACAAA TTGGTTTAGG 
    CAAACAAAGA ACTTTGTCAA AGACACGACA ACACTTTGCT CTACGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 108126 [Map]; Strand: w
      • AT2G01180.1 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: intron1 (CDS)
      • AT2G01180.2 - [+] show detail - phosphatidic acid phosphatase 1
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 54-3362-1 - 3-prime edge 
    CTTTAANTCG GNNGAGGTAT TTTACNGACC GTTACCGACC GTTTTCATCC 
    CTNNCTGANA NGGANGAGGC ACANAGNTAA AGCNTGATGT ANANNCTNNT 
    AANNNCTATG GATGATNNGA TATNTANNAN ACACAATNNC GANANGNATC 
    ATANTNTNCA TGTCTGTTTG CCANCATAGA TNGGNATNAG ANCCTCATAG 
    TCTNCTNTGC TACNGNTNCC ATGGGAAAAG ACAATGATGG ACATGACCTC 
    ATTGTACCNN NANNAAGGAC GNACACCANT TTCCNTATTA TGGACTNTCC 
    NTGTNNACGC TGTGCTNCNN NCCATCATAA NGTTCGNNAN GCATTCTACC 
    TGNANAGGAC ATGTGTGTAC CTATCTGNNC CACAGCATNC TNAGGCTGNT 
    CTTCGCCNTC TGNGATAACT GGCGTCATCA CTGACTCCAT CATGGAAGCC 
    ACCGGNCNCC CTNGCNNTAA CTTNNACTGN CNCTGNTNCC GNNACGGANA 
    NGAGNNGTAT GATGCGNGGG GANGTGTGNA TTGCCACANC ANGGCTTCTG 
    ACGTCAANGA ANGNCNCNAG AGCTTCNCGA NCGGACNCAC TNNCTGGNAC 
    TTTGCGGGGC TTACATTCCN TTGCCTTTAC CTCTGTGGCA TAANCAAGGC 
    CTTCAACATT GAGGACATGN NGNCTAAACT CTGCCTCGNT GATNTCCCTC 
    TGCTTGNCNC TTTGCTTGAG GGGATATCTT NNTGTGGATN ACTTACTGGC 
    ACTACTGGGA ATTATGTCTT NGANAGGANC CTNTCA

AT2G01180.1

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 2118 Blast hits to 2110 proteins in 392 species: Archae - 9; Bacteria - 357; Metazoa - 920; Fungi - 399; Plants - 198; Viruses - 3; Other Eukaryotes - 232 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01180.2

Model type
Protein coding
Short Description
phosphatidic acid phosphatase 1
Curator Summary
Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.
Computational Description
phosphatidic acid phosphatase 1 (PAP1); FUNCTIONS IN: phosphatidate phosphatase activity; INVOLVED IN: phospholipid metabolic process, response to stress; LOCATED IN: plasma membrane, integral to plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidic acid phosphatase/chloroperoxidase, N-terminal (InterPro:IPR016118), Phosphatidic acid phosphatase type 2/haloperoxidase (InterPro:IPR000326); BEST Arabidopsis thaliana protein match is: lipid phosphate phosphatase 3 (TAIR:AT3G02600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR