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54-3367-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18457182 [Map]; Strand: c
      • AT5G45530.1 - [+] show detail - Protein of unknown function (DUF594)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3367-1 - 5-prime edge 
    CNTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCAG ACAAATGGAA TATCACAAGT TGTGATAATG 
    TCTCTGTTGT TCCAAACGTC TCTTATCTTC CTTGCACCAA TGCGGAAACG 
    CACATCAAAG AAGTTGCTCG CCGCGGTTCT ATGGACAGCA TATCTTTTAG 
    CGGATTGGAC CGCTAATTAT GCGGTGTCTC AGATCACCAA GAACCAAGGA 
    AAAGAAACAG AACCTGGCGA TCCTCCAAAA AACAAGAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 18457168 [Map]; Strand: c
      • AT5G45530.1 - [+] show detail - Protein of unknown function (DUF594)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3367-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCACAAG 
    TCCTCTGATG TTCCATTTGT CTAATATCTT TTTTATTGCT GGTGGAATCA 
    CTTGCATCGT TGTTACTCTT TTGGTGTGGA AAAACTAAGC TCGTTTAAGT 
    ATCAAAATTT GCTGTTTCAT TTCATGCTCT CTTACTCATA GTACATATAT 
    ATAGGGGATA TAGATTAATT GTTAATTATT TGACCAAAAA TTTATAAATG 
    AACCTATTTA ATAACACGTG AATTATGTTT TCATATATTC AATTCTTATA 
    TTCCACGGTA ACTCTTTAAA CAAGGGCTTT TTTCTTGTCA GAATAAAATA 
    TTCTTTCCTT GTTGATAATA AAATCAAGAA AACCATACTT TACTCTTATA 
    CACACGTTAC TTAAAATAGT ACAAGGATTT TCTGTTTTTG GCTTGATTTT 
    ATGTAACTGA CAAAAACCTT AATTATAACT TTTAAGTAAA AAATATTTTA 
    AAACAAGAGA TATTCGTGAG TCTATATTAG TAGTTAGATT AATATAAAGT 
    TTTAAATTAA TACAGTTTCA TAAGAAAAGG GTGATACAAA TACTAATAGT 
    TAATCAGCCA TTATGGTGAT ACAGAGAAAG ATACAGACAG AACATAAATC 
    AAGTAATTAT TGAGATGGTC GGGCTGAAGC CCATTTAAGG CCCATTTTAT 
    TATCTCAGCC CAAGCTAAGG CGTATCTATC TTCTTTCGCT TTTTGNTTCT 
    CTCCGAANAA AAC

AT5G45530.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF594)
Computational Description
Protein of unknown function (DUF594); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: C globular stage, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF594 (InterPro:IPR007658); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF594) (TAIR:AT5G45470.1); Has 1338 Blast hits to 867 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1338; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR