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Mutant Lines
54-3369-1

54-3369-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26940430 [Map]; Strand: w
- AT5G67520.1 - [+] show detail - adenosine-5'-phosphosulfate (APS) kinase 4
  Distance: 0; Region: intron4 (CDS)
- AT5G67530.1 - [+] show detail - plant U-box 49
  Distance: -752; Region: promoter

NNTTATANNA NCGTGCGCAG CNCTGGTNAA ANTANANGTA ACTTTGNNNT 
GACTCTGCNN GNGAANCNAN CTTANCCNAN GTGTCTACNG NTCNTGCTTA 
NTTATATAAC CTTCTTGATC TATCCATTTG ATTATATGTA AATATATTGT 
TCCCCAAAAC ATTTCTTCTC CAGGTTTTAC AGGAGTAGAT GATCCATATG 
AAGCGCCTTT GGATTGCGAG GTTCATATAA TATCCAATTT TTGTTATATA 
AGTTGGAATC TAGCTCATCT CCGAACTTGA ATCTAATGTT GTGTTTCCGA 
CTACTCTTTG CAGATTGTAA TACAAAACAG TAGAGACAAG GGGCTTTCTT 
CTTCATCTTC ATCTTCATCT TCACCTTCAT CTTCGTCTTC TTCTCTGTGT 
GAAATGGCAG ATATTGTTGT GTCGTACTTG GACCAAAATG GATACCTGAA 
GAAACACTCC ACAAAATCAC GTGATTGTAT GTAAATGTAA TATTAATATC 
ATTGTTGTAA CGTTTCTTAA ACCTATTTTA CCTATGGACG ATTAAATTGT 
GAAAACATAA ATGTAATTCA CAATCTGCAA AGAGTTGGTA AGAAAAACTT 
GTTTTATTGA TTGAGAGAAT GAGATTATTA TATGGCCGCC AAGTTGGCGC 
CAACTCTCCG GCTTTTTAAG TAATCGAGCA TTTGGGCCTA

3 prime edge [+] show sequence

Chromosome: 5; Position: 26940316 [Map]; Strand: w
- AT5G67520.1 - [+] show detail - adenosine-5'-phosphosulfate (APS) kinase 4
  Distance: 0; Region: exon4 (CDS)
- AT5G67530.1 - [+] show detail - plant U-box 49
  Distance: -866; Region: promoter

GTATAAGCCC TTTGGATCTC TAGCTTCACA AACATGGAGT GGCACATCCA 
TAAATACCTA TCAAGAGAAC CAAGAGAAAG TCAGATTGAT GTTGAGACTG 
GGATTCAAAT TCATGAACTT GGAGAAACCT CAATGAAATC TCCTTGTGGT 
AATAATGCAC GGCAGGCAGC TCGTTCTATC CGGTAAGGAG ATATTAAACT 
TGCAATACAG ATAATACCAG AATCTGCAAA CAGTTTAGCC ACTTCACCAA 
CTCTTCGAAT GTTTTCAGCT CGATCATCTG CTTCGAAACT AAGATCGCTG 
TTTAAACCAT GTCGAACATT GTCACCATCA AGTATATACG AAAGCT

AT5G67520.1

Model type: Protein coding
Short Description: adenosine-5'-phosphosulfate (APS) kinase 4
Curator Summary: Provides activated sulfate for the sulfation of secondary metabolites, including the glucosinolates. Redundant with APK3.
Computational Description: adenosine-5'-phosphosulfate (APS) kinase 4 (APK4); FUNCTIONS IN: kinase activity, transferase activity, transferring phosphorus-containing groups, ATP binding; INVOLVED IN: male gamete generation, sulfate assimilation; LOCATED IN: chloroplast, plastid; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Adenylylsulphate kinase, C-terminal (InterPro:IPR002891); BEST Arabidopsis thaliana protein match is: APS kinase (TAIR:AT2G14750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G67530.1

Model type: Protein coding
Short Description: plant U-box 49
Computational Description: plant U-box 49 (PUB49); FUNCTIONS IN: ubiquitin-protein ligase activity, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), U box domain (InterPro:IPR003613), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT1G01940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR