1. Home
  2. Mutant Lines
  3. 54-3384-2

54-3384-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463836 [Map]; Strand: c
      • AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon7 (CDS)
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 54-3384-2 - 5-prime edge 
    GTCACAACTC CAAGAAGAAA GATTCAAACT GAACTCATTC ATCACCGGCA 
    AATCTGACAT GTTTTCCTGT CGGTGTAGGA AAGCCTTTCA AACGCAACAC 
    TCCTGGAGAT TGATCTTTGG CCTCCACAAT CTCTTCATCT TCACTGTCAT 
    ACACAAATCT AGTGTGTTTC CCTGCAAAGT CAGTCTCTAC GCTCATCTTC 
    CTAATTCCCT CACACAACCC ATCCACAATC CCTCCCTCTT CTTCCTCCTC 
    TTCCTCGTCG TAGTATTCCT CATCATATTC CTCACCGTAA GAATAGGCTT 
    CTTCCTCTTC ATCATCATAC TCTTCGTCTT TGGCACTTGC ATTGGCCTGC 
    ATCGACCACA CCGACGAGTT ATCATCCTCT GGGTTTTGAG TCACCACAGA 
    TGAGCAGTCT GAGCTCTCCC ATAATTCTGA TTTATCACTA AAGTCCAGAA 
    GCAATGACCG AGTAATGCTC GGGCTCTTCT CTAACTCCAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26463952 [Map]; Strand: c
      • AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 54-3384-2 - 3-prime edge 
    GTTGTGACAA AAAGCCTCAT ATGTCTCGAC TTTTTTTTTT TTTTTTTTTN 
    GGGGGGGGNN NAAAAANNNN AAAATNGNTT TTNGGTNNNN CCNNGGGGNT 
    TTTTTNNAAA ANCNAAANGG GGAACGGGNA AANNNCCNTT TTNNTTTTNN 
    NNNTNNTTNG GNNGGGGGNA AAAANGGGNT TNAATNGGGG NNNNNCCCAA 
    NCCCNNAAAA AAAAAANCCG GNCNTACCCN NNTTAAAAAA NAANCNTTNG 
    NNTTAAAANN NNAAAAANTN GGNAAAAGGG GGGTTTTTTN GGGNCCCCCC 
    CCCCCCCCCC NAAAAAAAAA AAAAACNTNG GGGGNNNTNG GGGGTNAAAA 
    AAAAANCCCC GGGNNNGGGG NAATNGGNCC CNNNNAAAAN AANTTTTNGN 
    AAAAAAANTN GNNTNCCCNG NNCNGNTTTT TCNAAAAAAN CCGGGGNNAA 
    ANAAAAAAAA NNNNTTTTTT TTTTNAANCC CCCCNAATTN GGNTTTTTTG 
    GGGGGGGNNA NTCCCCTTTN CCCTTTNGNN CCNNTTTTAA ANTNGGGGNN 
    GGGNNGGGGG GGNGGNCNAA ANNNTTTANN NGGGGNNNNA AAGGTTNAAA 
    AANGGGTTAA TTGGGGTTNN AACANNGNCC CNCCAAAAGG TTGGGGAAAA 
    TTTTTNGGGG AANTNNCCNC CGGGGNNGGG AACCGNGNGN NTTTNNTAAA

AT5G66230.1

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G66230.2

Model type
Protein coding
Short Description
Chalcone-flavanone isomerase family protein
Computational Description
Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link
InterPro Scan - TAIR