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54-3434-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9720025 [Map]; Strand: c
      • AT3G26511.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -6839; Region: intergenic
      • AT3G26520.1 - [+] show detail - tonoplast intrinsic protein 2
        Distance: 2418; Region: intergenic
    Flanking Genome Sequence: 54-3434-1 - 5-prime edge 
    TATATATATG ATCATATTTA AAGGGCCATA TTTAGTCTTT TTGAAAATTG 
    AAAGGTTGTT ATGGCTTGGT CGGTTTGGAG CAAGTAAGAG TTCAAAATTA 
    TAATTCATAG AGATCACATA TTTAAGTTTG GTCGGTACGT TCACGTTCTC 
    TCGTCATTCT CCGACCAACT ACGTCCACGT CTCTCTGTCT CTTCTACCCA 
    ATAAACGTAA TCATTTTTCA GGATTTTCTA CATTTAATTT CTTAGGAAGT 
    TAGGCCCTAC ACCATAACGT GACAATTTAG AAAAAGGGCC AATTCTTTCT 
    TTTTTCTTTC CTTTAAAAGT AAAATAAAAT GAATATGACT ATTTTGTTCA 
    TCTTTTGTGT TATACATATG ACTTTTTCAG TTTTGGTGTA AGTTTCTAAT 
    AAAAATAAAA ACCATCAAAC ACACTACAAA TTGATGCAGC GTAGCATCGA 
    TCCTTAATGG GCCATGTTTT GGTGTTTACT TGCCCATTAA GTTACAGCTT 
    CGATTAGGTG TTTTAGGTTG CATTGACGGT TTATTATTTC CTTTAACGAT 
    TAGGACTAGG GTTTTGCTTT ATGTTCCAAC GCCTCTATAA ATAGGGAACG 
    TAAAAGCATT ATAGATCATT CATATTGCAT TTGTAATTTT TGTTTTTTTG 
    TCAAAATTGT ATTTATAAAA TTAAATTAGA GATAATCTAA GTTN

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9720141 [Map]; Strand: c
      • AT3G26511.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -6955; Region: intergenic
      • AT3G26520.1 - [+] show detail - tonoplast intrinsic protein 2
        Distance: 2302; Region: intergenic
    Flanking Genome Sequence: 54-3434-1 - 3-prime edge 
    TATATATATA TATGAGGAAA TGAGAGAGAC ATTATCTTAT AATCTGTNGC 
    ANACTAGCAN TGAAAAATNA CACTGTNACA AATATTGAAG TGTTTNACTA 
    AGAAGAAAAA AAATAAAAAA ATAAAAAATA TATATATATA TATATATNGA 
    AGAGTGTATN TGTNACTATG NGGTANACAN GCGNGGCNNG GANAAAAANC 
    CGNTCTTCTA TNACAAGATN ANATATNGCC ACATANTNNG ATATCGTGTG 
    TANNCATATN CCGTNTGTNC NGGGATTCNA ATCTCGTANT TATCGGGGGN 
    GATAAATATC TCACATATCT NTGTATNTAA NNGNAGAGAC ACATCNCCNT 
    GTATATAAAA GGTGTGTANT CGCGCTCTAT GANGATATAT ATAAAGAAAT 
    ATTTCTNCAT CTNNCCTGTC TTCTNCCTNT GNCCCTTCAC AACNNGATGT 
    TTATTTCANA CGNGATAAGN GATNTAAGNA ANACTATTCT GTGTGNGAAT 
    CTANCCCAGG GGGGNGGATT TTCTCNAGAT TTNTATTTTT TTTTNGCCAC 
    CCGCNNGANT AAANTTCCCT NAAANGGGTT TTACCTANGG NNGNGNACAN 
    NAAAAAAAAN AANNCCCCCC ANCCGGGCCT AGNNGGGNNC CCCCNCAANA 
    NTNGGNCATA NTTNGGGNGN NCNCTANNGG AAAATAAACA GNCNCTTTNA 
    AGGGTNNNAA AATTTTTCGC N

AT3G26511.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G26520.1

Model type
Protein coding
Short Description
tonoplast intrinsic protein 2
Curator Summary
gamma tonoplast intrinsic protein 2 (TIP2). expressed throughout the plant and transcript level is increased upon NaCl or ABA treatments. NaCl stress-sensitive yeast mutant strains exhibit more resistance to salt when expressing this protein.
Computational Description
tonoplast intrinsic protein 2 (TIP2); FUNCTIONS IN: water channel activity; INVOLVED IN: response to salt stress, transport, defense response to bacterium, hydrogen peroxide transmembrane transport, water homeostasis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: gamma tonoplast intrinsic protein (TAIR:AT2G36830.1); Has 10870 Blast hits to 10853 proteins in 2179 species: Archae - 81; Bacteria - 5139; Metazoa - 1484; Fungi - 429; Plants - 2489; Viruses - 0; Other Eukaryotes - 1248 (source: NCBI BLink).
Link
InterPro Scan - TAIR