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54-3456-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 16442236 [Map]; Strand: c
      • AT2G39360.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -2082; Region: intergenic
      • AT2G39370.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 1894; Region: intergenic
    Flanking Genome Sequence: 54-3456-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCG TACCTTGTTA TTATCATCTA TTGATGGGTT 
    AGGTTTTGAG ATTTATTGTA GTCATGTAAA ATTGTAGATA CTATATTAAT 
    AGTTGTATTT TTTTTTATAA TGAAAATGAA TCTACAACCT CGATTATTGT 
    AATTATAATT GTAAAACCAA AAAAAAAAAA AAAAANCCCA AAANNCCCCN 
    NAAAANCCCN CCCCCCAAAN TTTTAAANCG GNAAAAAAAA ANCCCCTTTT 
    TTTTNNTTNN NNNNGGGNCC CNNNNNAANN NNCCNNNNNN NNNGGGGGGG 
    GGNAAANNNN NCCCCCCNNN NNGGGGNNAA AACCCCCNAN NTTTTNCCCC 
    NNANNNNAAA NNGGGNCCCN NNCNTTTTNN GGNCNAAAGG GGTTTTTTTN 
    CCNNAAANGG GTTTTNNNCN CCCCNAAAAA AAANNNNTTT TTTNNANGGG 
    GNCCCNAAAN NNNNNNTNNN AANGNNCCNT TAAAANNGGN CCCNNNNNCN 
    TNAAAANGNT TNCCNTTTAA ANGGGGGGGG GGGNAAAATT TTTTTTNNAN 
    GGGGGGGGGA NAAAATTCCC CCCCCCCNNN AAANCCAAAA AAACCCNGGN 
    NNGGNNNTTT TTTTNTTTTC CCCGGNTCCC NANANGGGGG GGGAAATTTN 
    AAANCCNNGG GGGGNNTNTN NNNCNNGGGG GAAAAAGNCC CCCCNTTTNN 
    CCCCTTTCCG GGNGNAAACC T

AT2G39360.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 117164 Blast hits to 115761 proteins in 4506 species: Archae - 99; Bacteria - 13343; Metazoa - 43886; Fungi - 9766; Plants - 32814; Viruses - 370; Other Eukaryotes - 16886 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G39370.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37380.1); Has 184 Blast hits to 178 proteins in 53 species: Archae - 0; Bacteria - 58; Metazoa - 9; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR