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Mutant Lines
54-3476-1

54-3476-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 12122097 [Map]; Strand: c
- AT4G23140.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
  Distance: 0; Region: exon1 (CDS)
- AT4G23140.2 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
  Distance: 0; Region: exon1 (CDS)

ATGGTAGTGG TGGTGTTTCA ATGGCGCTTT CATTGTAGAA CGGGTAAAGC 
TCGTACCTTG CAGTACAACT CGGCCAGTAA AGTCTTGCTC CAATTCTGGA 
AAGAGCCATT CCATTGATGG AACTTTGCAA ACAACTCAAG CAGTCTGGTC 
TTGTAAGATC AGGAGTGCAC NTGAAGCAGC CCGTACAAAT TCTGGTATGC 
GGTCAATTCG GTATTCACCG TATATAATTT TCTAGAACTG TTGGCTGCTT 
TACCGGCAGC TTCACTCATC GTGGAGGAAA CAAAACTTGT GAACCCGTCT 
ATTTGTTTTT GATTTGAAGA AATATTATTG GTGTTCTGCA TGATTAATCC 
TCCTTCGTAT ATAAGGGTCG CTAGAATATT CTTGTGAGAG TATCTGAGAA 
TGCATTCCTC GTAGTAAAAC ACGGCTTCTC TCGCCTTGGG ACAAAGATTT 
AGGGTTTGAT TGACAGAAAA GGCTATGCAG TTACGGCAAA CTTCCGGTGA 
GACGTCTCCC CGGCAAAGGA AAAGTCCGGT GACTCTGTCG GGGGCTTTTC 
CTGCCGTGGC GTTTTGGAAT CCGGTGGAGT AAGANGCGTT ACGTGAAGAT 
AGAGAGGACA AAAGGGTTTT GAGATTGGTG AAGTAAATGC TGTTACTTGA 
GAGTAATTTG GTCGTTTTTG GACAATAATA TATAGGTTAT AAG

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 12122222 [Map]; Strand: c
  - AT4G23140.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
    Distance: 0; Region: exon1 (CDS)
  - AT4G23140.2 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 6
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-3476-1 - 3-prime edge
```
ACCACCACCA CCACCACCAC CGGAGTCGTT GGTGTCTACT CCTCCGATAT 
CATCTTCTTC ATTACCTGGT GAACTCATTC TCCGTCCTCT CTTTTTATTT 
CCCCTGCTTT CGTGAAATAC TAGTAGGGAA AGTTTTGTTC TTTTGATTAA 
TTTTTTTATT TTTATACTTT GTGGCATTAT CTGATCTTAA GCCAATGATC 
TTTAAAAAGC AGGCAAAAGT GGGAATT
```

AT4G23140.1

Model type: Protein coding
Short Description: cysteine-rich RLK (RECEPTOR-like protein kinase) 6
Curator Summary: Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)
Computational Description: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (CRK6); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G23140.2

Model type: Protein coding
Short Description: cysteine-rich RLK (RECEPTOR-like protein kinase) 6
Curator Summary: Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307)
Computational Description: cysteine-rich RLK (RECEPTOR-like protein kinase) 6 (CRK6); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 8 (TAIR:AT4G23160.1); Has 119608 Blast hits to 118061 proteins in 4543 species: Archae - 108; Bacteria - 13357; Metazoa - 44377; Fungi - 10093; Plants - 34036; Viruses - 376; Other Eukaryotes - 17261 (source: NCBI BLink).
Link: InterPro Scan - TAIR