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Mutant Lines
54-3484-1

54-3484-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 26597931 [Map]; Strand: c
  - AT5G66631.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 54-3484-1 - 5-prime edge
```
CTCTTAACAA GCAGCTCTTT CGTCTCTCTG TCAGGCATCA GATTCGAATC 
TTTCATGTCT TGGAACACTC TGTAAGCAAG CACTGATCTT TCGCATCTGC 
AATACGCTTG AACTAGAAGC T
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 26598047 [Map]; Strand: c
- AT5G66631.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

GTTAAGAGTT TGTGGAGAGA AGAGAAGCGA AAAGAAGCGG CTGCGGTTGA 
AGAGAGCTAC GAGGAAGAGA ATGATAACAA GAATAGTAGT AACGTTTTGC 
GTTTGGCGTT GAAGGGTCAT GTGTGGACCA TTAGTTCTAC AGACATTTCT 
CGAGTCTACA ATCTCTACCG CGATTGTGTT CTGAAAACTT CGACTTGACA 
ACATTTATTC TAAGTTTCGT TTTTATTGGG CCCAATGATC GTTAAAGGCC 
CATAGAGTCT GTTGCTGATA TATTATCTTA AAGCTGGTTG GTAAATTAAT 
GGGTCAACGC CATTCAAACT AGGCAAACAA GAATATACAA CCGTGCCTCA 
CACGCTCTCA TATCTTTTCT TTGATCGTTG ATAGTTACTT TTTGGTCAGT 
ATTCGGACTT TGACTATGAG AACCACGTGA ATGGCCCATT CAAATAGGTG 
TAAGTGTAAC ATCTTTTTAT CCTTTTTTTA ATTAGGATCA TACTAAATTA 
ATAACAAGAA TCATAAATTC CATTGGCAAT ATTTGCGAAA ACATATAAAT 
TGGCAATCAA ATCATTTGTT TTTGAAAATC AGATAGTCAA AATATTCTAT 
ACTGTATATT GAATTTTGCA ACCGAAATCA TTTACACTAT AAATCGATTT 
TTCTTTTGTT GAAACCATAG AAGATTATCT AAAACCGATC CAGGGATTAT 
GTTCGAAATA A

AT5G66631.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR