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Mutant Lines
54-3513-1

54-3513-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 4873615 [Map]; Strand: c
  - AT5G15050.1 - [+] show detail - Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
    Distance: -17; Region: promoter
Flanking Genome Sequence: 54-3513-1 - 5-prime edge
```
GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCAAC ATACGAAAAG AACAGACCAA CAAACAAACA 
AAAACACACC AATTCCTTCA TTCATCTTCT CCATTTCGTA ATTCGTACAC 
TTCACTCTCA AGTCTCTCTA AGCCACAAAC CACTGAAGAA GAATCCATCT 
AAGAGCTGTT AAAAATTGAT GAAGCT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 4876796 [Map]; Strand: w
- AT5G15060.1 - [+] show detail - Lateral organ boundaries (LOB) domain family protein
  Distance: -847; Region: promoter
- AT5G15070.1 - [+] show detail - Phosphoglycerate mutase-like family protein
  Distance: 0; Region: intron1 (5UTR)
- AT5G15070.2 - [+] show detail - Phosphoglycerate mutase-like family protein
  Distance: 0; Region: intron1 (5UTR)

TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCACAACG 
AAAAATTCGT TCAGAGAGAA CAGAGACTAA ATCGCTTGGG TTTGGAACAA 
TCTCGGAATC ATGGCCGCAA CTAAGATAGG ATCATAAATA GAAGAAACAG 
GTAGTGCATA ACATGAGAGA GCAATGCGAG ATCTCGCAGA GAAAAAGTCG 
AGGAGAAACN GTTACTGGGG AAAATGATGA TCACAAGCAG AGAGAGCAAT 
AGCTAGAGAT AGTGCGCTGA TGGCACGAGG AAAGAGAGAG AGCCAGAAGA 
TTCAGGCGTC AGAGGCGTTG CTTTGAATCA GAATTACAAA AAAAAAATGA 
TTNCCATTNT NTNTANATTT TGCTNGGTTT ATTAAAATCA TGGNCNTTAA 
TAATTTAATT ANCCNCCGNC CCNCANCTNT NCAAAACTCA NGNGAATTTT 
TAAAAAATAA GNGGATNCNT GATAATNTTT NCGGGGTTCT TTTTAGGAAG 
TTCTAAAATN GGGATTATTC TTGNGTNTCC ACAATTAANT NTCNCAATGT 
ANTTNTNCNC TANTAAATTC NCAATGCCTA NTGANAAGGT CANTANANCN 
CGTTTTAAAT TTTCAAGTAA TCGAAATGGT CCATGTGTGT AGCCTNTCAA 
ATNTNTTGTT NTCCANTCAA ATGACTGAAA GAGCAAATGT TGAANAAATA 
TTGTCTGTTG GTTAAAGCCA AATTCTAAAA TATTGTTGAC TCATGGTTCG 
CCCCTAATTA NT

AT5G15050.1

Model type: Protein coding
Short Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Computational Description: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 926 Blast hits to 925 proteins in 118 species: Archae - 0; Bacteria - 49; Metazoa - 525; Fungi - 0; Plants - 316; Viruses - 14; Other Eukaryotes - 22 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G15060.1

Model type: Protein coding
Short Description: Lateral organ boundaries (LOB) domain family protein
Computational Description: Lateral organ boundaries (LOB) domain family protein; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 22 (TAIR:AT3G13850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G15070.1

Model type: Protein coding
Short Description: Phosphoglycerate mutase-like family protein
Computational Description: Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT3G01310.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G15070.2

Model type: Protein coding
Short Description: Phosphoglycerate mutase-like family protein
Computational Description: Phosphoglycerate mutase-like family protein; FUNCTIONS IN: oxidoreductase activity, transition metal ion binding, acid phosphatase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, embryo, leaf whorl, flower, seed; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-2 (InterPro:IPR000560), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase-like family protein (TAIR:AT3G01310.2).
Link: InterPro Scan - TAIR