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54-3524-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26430630 [Map]; Strand: c
      • AT5G66110.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-3524-1 - 5-prime edge 
    CAAGCGGGGC CACTAGAGGG TCGGTGAGTG CATTACGAAC GTAACCAGGA 
    GGGGCCTTCT TGTCGTAGGC ACCAGGTGCG TAAGGGTGTG GCACCACCTC 
    GTAAGGTACG TAAGGCCACA GCTCCGCCTT CTTCCCTGTC CGATGCATCA 
    CCCGATGCAC CACCTTGCTC GGTTGGACGA ATCCCTCGAC CGTGAGTTTG 
    CTCTGTTTAG GATCGACGGT GACTTTGCTG ACTCCTTTCA TGCCTTCCAC 
    CGACTTCCTC ACCCGTCTCT CGCACCCTTC GCAGTCCATC TTCACTTTTA 
    TCTCCACCTT CTTTTTTCAT CATACGAAAC ACAGTCTCGT TACACAACAG 
    TTACAAGCAA AAAAAAGGAA TCAGATATAT CAGAGAAGGG AGAAGAGTGC 
    CTGGAACTGC TTAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26430746 [Map]; Strand: c
      • AT5G66110.1 - [+] show detail - Heavy metal transport/detoxification superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 54-3524-1 - 3-prime edge 
    CCCGCTTGCT CGTGCCAGCT CCTTCGAGGT CAAATACACT TCTGCTTTCA 
    GCGATGACAA TCCCAACGCT TGTACCATCA TGTGATCAAT TTATATATAT 
    AGTCAACTAC ACATGTGACT ATGTAAGTGT TTTTATATAC CCTTTTTAAG 
    TAATTCTGAA AAGACAGTCT GAATGTTTGT ACGAGTCATC ATCTAAATTC 
    CACTGAAATT AAAAGGGAGA AACAGAAGAA GAGAGAGGTG AGTAGATGGA 
    GGAGTAACAA GAGAAAGAAG AGAGAAAGGT GAGAAGCCAT GAATAGACTG 
    ATTAGGCAAG CCATGACCCA AACAGGGTAT ATCAGAAGCA GTGTGTAACA 
    GATGACGACA AGGCAGTAGC AGACGAGACT CGCCACTTTC TCGATAGCTT 
    CTCCCACCGG CATCTTGATT TGCGTATTTG CTACTCCTCT GGATTACATG 
    ACTTCATTTA AATAAATAGT AAGAAACACA CACAGAGTCT TTGGAGAAAT 
    ACATGCACAA GAAGTTGTTT CCTCTCTAAA CGGGACAATG CATCCCGCAT 
    TTCAGCCCTT CCTCTGTTTC TTCTTTTTCC CCTCTGTTTT TGCATCTTCA 
    CTGTGTTTAC GTAACAGAAA CGTGCTTTGT CATAAAGCTC AAGTAACAAT 
    TTCAAGAGGC AAGTATCCAA ATTGAAACGC ATATGGTGTC CAATAACGGG 
    GTATTTCTTC TTTTAATAT

AT5G66110.1

Model type
Protein coding
Short Description
Heavy metal transport/detoxification superfamily protein
Computational Description
Heavy metal transport/detoxification superfamily protein ; FUNCTIONS IN: metal ion binding; INVOLVED IN: metal ion transport; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121); BEST Arabidopsis thaliana protein match is: farnesylated protein 6 (TAIR:AT4G38580.1); Has 1185 Blast hits to 1108 proteins in 39 species: Archae - 2; Bacteria - 2; Metazoa - 2; Fungi - 3; Plants - 1176; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR