Home
Mutant Lines
54-3542-1

54-3542-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26462154 [Map]; Strand: w
- AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon4 (CDS)
- AT5G66220.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon4 (CDS)
- AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: -431; Region: promoter

CAAGGAAGAG CCTCGCTGAG AGATTATCTA AGCTGATGAA CAAAAAAGAC 
CCGTACAACG AAGCTAACGT CAACGTAGCT ACAAAAAATT GAAACTATTC 
CAACTCGCCC AATCTTGAAT AATTTTAGAA AATGAAGCCA GCGGAGGATG 
TTATGTGACT TATGATGACA GCTAAAATAA AGATTGTTGT GACTTAATTA 
AGACAGTTTT ATGTTTTTAG TAAGATTCTA AAGATTATGA AAGATGATTT 
TGTGTTAATG AAAAAATCAG TGATCAAATA AAAGAGGTGG GCCTTCCAAA 
ATCTAATGTA ATAGTGTGGG CTTTTAATCA TGGCCTTTTT AGGGACGAAA 
AAGTCCATAA TTCAGCGAAG GAAATAACAC AACGGCTAGT TTGATAAACG 
GCTCCTTCCA TTTCTGTACC CAACGGCTAC TTTCTTTCAA AAACCCTTCA 
CAGCGTTTCA ATACCCCTGT TTATTTATAC TTTACCCAAA TTCCCAAACG 
CCACAATCAC TTGTCTGATT CTCTCATATA ATAGAGTTTT CTTTCTCTTC 
TCCTCTGCTT AATTTCCCAG AAATTACTCT TTCTGTGCTT ATCGGATTCA 
ATAGATTCTT AGTAAATCGT AATGGAGACA CCATCATCGA CAAGAAGAGT 
CACGAGATCT CAGACCCGCT CTGCTATCAA TAATCTCTTA TCCTCAAGTA 
AGT

3 prime edge [+] show sequence

Chromosome: 5; Position: 26462038 [Map]; Strand: w
- AT5G66230.2 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon4 (CDS)
- AT5G66220.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: 0; Region: exon4 (CDS)
- AT5G66230.1 - [+] show detail - Chalcone-flavanone isomerase family protein
  Distance: -547; Region: promoter

CTTCCTTGTC GCAGGGGATA CACCATTCTT CCCTATCATC GACTCAAGAA 
CTGCCTCACC CAACAACTTA TTCTTGATAA CCGCTTTTCC AGTTTTCGGG 
ACTCTCTCCT CTTTCGAAAA TGCAATCTGC ATCACAAGTT GTCAAAAGAT 
CTCGATCATT CATTCGACCA ATATTATTCG AAATGATAAT CCGAAAAATA 
AAGTTGACTC ACTGTGAGAG AGCCTTTAGG ACAGATAGCG AAGATGATTG 
AAGAGCCGGG AGGGAAATCT TGGTTTTTGA AGACCATCAA GAATTGGTCA 
ATGGCTTTGG CTTCGGATCT TGTGTATTTC CCTGACGCTT TCATGATCTC 
CTCACAGTAT TCTACTACTT TCTCTGAGTA TCGTATCCCC GTTAACCTCT 
TTTTCATCGT CACCCTTGCC AATTTCTCAA ACTCACCTTT TCCCACAAGA 
GAAGAACAAA AAAAATTGTA ATATATGACG TGTTTAAGTT GAACATGTAA 
TAACTACAAA AATCGTGTGA AGTGTGAACG AGATAGAAAA GTGTTTTAAT 
TAAATTAGCA CGTAATAAAG TGTACACCAC CTGTGACGAG TTGACTGAAG 
AAAGGGACGG ATTCCGTCAA CTCCTTTGCA TTCTTGCCTT TCCACTTAGC 
GGAGATTGAC GGCAGTGCCA TGGCTTCAAG GTAGACTCCG ATGACCGTCA 
CAATCACGAA CTTGCCTTTA ATATCAAACC N

AT5G66220.1

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.2); Has 378 Blast hits to 377 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 378; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66230.1

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G51230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66230.2

Model type: Protein coding
Short Description: Chalcone-flavanone isomerase family protein
Computational Description: Chalcone-flavanone isomerase family protein; FUNCTIONS IN: chalcone isomerase activity, intramolecular lyase activity; INVOLVED IN: cellular amino acid derivative biosynthetic process, flavonoid biosynthetic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone isomerase, subgroup (InterPro:IPR003466), Chalcone isomerase, 3-layer sandwich (InterPro:IPR016088), Chalcone isomerase (InterPro:IPR016087); BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66220.1).
Link: InterPro Scan - TAIR