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54-3567-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 44081 [Map]; Strand: w
      • AT4G00120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -884; Region: promoter
    Flanking Genome Sequence: 54-3567-1 - 3-prime edge 
    NNNACANGGA NCAGTTNCAN TCATGNAAGG CTTCTCCTAC ANCTGNCGGG 
    TAAGNCAGNN NNAAATAAAG CGCNGAGATG NNGGANGGTC AGTTCTGNAT 
    ACTTGTCTTG CTGTGGAAGT AAGCNACATA ATTAGCCANC TTTTGTCATC 
    TNAACATTTA GTTGTTTTTT TTTGGTTAAA TTTAGNTAAT AAATCTGATA 
    TTATGAATCA AATCTAATGN TNGGTTAAAT TTAGTATTTT TTTNACATAA 
    ATAANAACAT GTAANGTTNN TGTNTNTTGG GGAATCANTT TNTTAGCTNG 
    GGAAACGTNT NCTTCTGGAA ATNCTNCGAA GAATCTTAAC TATTTGCAAA 
    ATTNATAATT ACACCTCCCG AAAAATACAN ACGACGGGAC ACAGACACCA 
    TNTAANCNGG TTAAGAATCT TGGAAAATTG GTGTATCCNT ANCCTATNTA 
    AANACTAANG NAACTGGTTG GGNTCAAAAG CCTTTTCAAA AGTTCCATCT 
    TTTTTANTTN ANGGGACNTT TTNCATAGNA AANAANTTGA GTCANAAAAA 
    ATAATGGTNA TTNGGNAAGT TTTTTTTNNA TNANCCCGCC CATNTTAAAA 
    ANTTANTTTT TTTTNNNTTA CCNNCTTCTC AATTTNTTTT TAAAAACCNN 
    GGGGGCCNTT TCTTAAAACA NTNCTTTTAA NGATTTTTAA TATTNCCCAA 
    AATNTGCANG GNNCCCTTGN NATTTNACNT TTAAATNGGC AAAACATTTT 
    TTTAATTNGG AGCCAAAANG GGAAANGGNA AANNCCTCCN

AT4G00120.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
INDEHISCENT (IND); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G09750.1); Has 2280 Blast hits to 2276 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR