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54-3578-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10144544 [Map]; Strand: w
      • AT2G23830.1 - [+] show detail - PapD-like superfamily protein
        Distance: 33; Region: intergenic
      • AT2G23834.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -4122; Region: intergenic
    Flanking Genome Sequence: 54-3578-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTGT GCAGAGGTTC CGATTCTCCC ACCATTGTTG 
    ACCATCCTTT GGAACGACGC CGTTTTTGTG ACGGTGCTCA AGTTGGGTCG 
    TTTTTTGTGT TGCTTGCTTT TTGTCTCTTC ATTACTCTAA TGGGCCGTAA 
    CAACTACGTA GACTTGGGTA CTTTTTTATA TCTTATTATT GGTCAACTGA 
    TTTTAGTAAA TGAAGAGAAA ACAACCCAAG AAGGAGTGCA TATAAATCCA 
    TGTTTATAGT TAGGAGGCGT GGGCATTCGG GTATCCGTTC GGATTCGGTT 
    CTTTTTTTCC GGATATCGAG TCTATTCGGG TAGGAGATTG AGAACCATTC 
    GGATATTCTA AAAATTTGGT TCGGTTTCGG TTCGAGTTCG GGTCGGTTCG 
    GTTATTTTAG TAAAAATGTA AAAACAACCA AAACTACCCA AAATATTTTC 
    GGGTTCGGGT CGGATTCGGT TTTTTTTACT CATATATACC TAAATCTACC 
    CGAAATATCC GATTATCCGT AAATATATTG GTTACTTTTT ATCCAAATAT 
    AACCAAATGT AACCAAAATA TTTAAATTAC CTAAAAGAAA ACTATAACAT 
    TTCTTACTTT TATTCCAAAT ATATCAAAAT GTATATGAAT TACTAAAAAA 
    TCTAGTATAT TTAGATTTAT AATTTTAATT TTGGGTGTTN GAGGTNTTAT 
    AAATATATAT ATAACTAATA TTTTTANGNT AACATTTAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 203101 [Map]; Strand: w
      • AT2G01450.2 - [+] show detail - MAP kinase 17
        Distance: -903; Region: promoter
      • AT2G01450.3 - [+] show detail - MAP kinase 17
        Distance: -809; Region: promoter
      • AT2G01450.4 - [+] show detail - MAP kinase 17
        Distance: 0; Region: exon1 (5UTR)
      • AT2G01450.1 - [+] show detail - MAP kinase 17
        Distance: -795; Region: promoter
    Flanking Genome Sequence: 54-3578-1 - 3-prime edge 
    AAGAGACTTT CCTCGAGATT TCTTATATTC GCCTGCTAAA CGCTGTCGTA 
    TTAGTGGGTA GATGAAAAAG ACAGAAGGGC AAATGAGCCG TGTCTTCCAT 
    AATTCTCAAC AAGATAAGAT AAGGTATGGC TCGCATTTTT AGGTATTGTT 
    TAATCTTCGG TTGCGTTTCT TATCTTTTTT TTTTTNNCCN AATTTCNNTT 
    ANCNGGNATT NNATTNNANC NNNTNCCNNA TTTNNAGTTT TCNNATTNNA 
    CCAAAANGCC CTNANCNNTT TTTTCNATTA NTTAANGGCA CCTNGGTTTT 
    TAAAANTNGN ANNGGNAAAA TAACCCNACC CGNTTTTTTN ANCGGAACCN 
    TAAACCTAAC CTAANNCAAN TTAAAANTTA AAAAATANTG GANTAAATCC 
    TAANTNNTTN ACCCAAAAAA ATCAAACCTN ANTCGGGNCC AANCCAAAAT 
    NTTTGGGTAC CCAAAANTTN CCAAAATNTA NTTNTTTTTN NAANCTAAAN 
    ANTNAAAAAN TTTNNAAAAN TTTTTTAAAN TNGTAAAAAT TTTANAANTT 
    ACCCAAAAAT TTTCCCAAAT TTNCAAAACA AATTACCCGA NNGGATNCTA 
    AATTTTTTTT AAAAAAAACA AATTCGATTT AAACCCNANC CGACCTCCTA 
    ANTTTTAAAN CCGAAAAAAT TGATANCCGA TNGGNTTTNA NCGGAANCCN 
    ATTAATTACC CGAAACCCCT GACTAAAAAA AGGTTTTTTC CTCCT

AT2G01450.1

Model type
Protein coding
Short Description
MAP kinase 17
Curator Summary
member of MAP Kinase
Computational Description
MAP kinase 17 (MPK17); CONTAINS InterPro DOMAIN/s: MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 9 (TAIR:AT3G18040.1); Has 113085 Blast hits to 112072 proteins in 3455 species: Archae - 88; Bacteria - 12258; Metazoa - 41885; Fungi - 11781; Plants - 27798; Viruses - 485; Other Eukaryotes - 18790 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01450.2

Model type
Protein coding
Short Description
MAP kinase 17
Curator Summary
member of MAP Kinase
Computational Description
MAP kinase 17 (MPK17); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 9 (TAIR:AT3G18040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01450.3

Model type
Protein coding
Short Description
MAP kinase 17
Curator Summary
member of MAP Kinase
Computational Description
MAP kinase 17 (MPK17); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: MAP kinase 9 (TAIR:AT3G18040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01450.4

Model type
Protein coding
Short Description
MAP kinase 17
Curator Summary
member of MAP Kinase
Computational Description
MAP kinase 17 (MPK17); CONTAINS InterPro DOMAIN/s: MAP kinase, conserved site (InterPro:IPR003527), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: MAP kinase 9 (TAIR:AT3G18040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G23830.1

Model type
Protein coding
Short Description
PapD-like superfamily protein
Computational Description
PapD-like superfamily protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: PapD-like (InterPro:IPR008962), Major sperm protein (InterPro:IPR000535); BEST Arabidopsis thaliana protein match is: vesicle associated protein (TAIR:AT3G60600.1); Has 878 Blast hits to 874 proteins in 197 species: Archae - 0; Bacteria - 0; Metazoa - 305; Fungi - 130; Plants - 374; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G23834.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR