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54-3602-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30157187 [Map]; Strand: c
      • AT1G80180.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3602-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCACAGGG AGAGTGTCTC CGGCGGTGGA CCCGCCGTCG 
    CCGAGACTGT CGGCGTTTGG GTGCTGCTCT GCCTTCGGGA AGAAACAGCC 
    GGGGAAGAAG GTTAATCAGA GGAAAAGGCC AGCGAAGCGT AGATCCAGAT 
    AGGCATGAAC TAAAGTCTAA AGTAAAGAAG AAGAACACAC ACAAAGATGA 
    GAAAACAAAA CAAAACAAAA AGAGAGTATA TATACTTATA CTGCTTCTTA 
    TGAATCTTTT TCTTTCTGTT TTTGTTTGTG TTTTTTTGTT TGTGCTTTAA 
    TGTTAAAACT GTTTAAACTC AGAGACTATA TATATGTTTA TATTTGTTTT 
    GTTTTCGTTG CAGACTGATC TTAGATTTTC ATGTATATTC TTGTTTTATT 
    CTATCTCTCT TTCTTTCCCG AGAGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30157247 [Map]; Strand: c
      • AT1G80180.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3602-1 - 3-prime edge 
    GTTTCGATGG TGGCGGATGG CTCCTCCTCC GTTGGATCGA CTCCTCTCCA 
    TACCTCCGTC AGTTCTGATA GGTTTGAGTC CTTCTCCGGC GATAGGTTTG 
    GTTGTCTGAT CCTGTACTTC CGACGTAATC AGCTTGGCCT GTTCGTCCTG 
    TTGTAGAGTC TCGCCTTTCC GGTCGTTGGC CGCTTGTTGG CTTAGCTCGG 
    CGATGAGACG ATCGTCCCAG ACTATACCCG AAGAGCCCTG TCGA

AT1G80180.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR