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Mutant Lines
54-3615-1

54-3615-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26231042 [Map]; Strand: c
- AT5G65630.1 - [+] show detail - global transcription factor group E7
  Distance: -2593; Region: intergenic
- AT5G65640.1 - [+] show detail - beta HLH protein 93
  Distance: -6013; Region: intergenic

AGCACAGGGC CATCCTCAGG TCTATTCAAT CCACTAAACC ACTATTAGAA 
ATATCACATT AGTCAAAAAG TTATGAATTT TTTCTGTTAT TTTATGAGAC 
ATCCAAATAT CAAATTCGAC ACGATTCATA TTATACATTT CCTTCGAAAC 
AATTAGAACG ACTTTTGAAA TAAAAACAAA TGGGACGAAT AGAAAGAAAA 
AAAAAGAGTG GGGACATTCA ATTATTACAA CATAAGAAGG GAGCTTTATG 
AGAGAACAGG AGCCAGATTC AGTTAATTAT GTCTACTTCT GGTATTATAT 
TTGTTTTGTT TTTACACAGA TTTGTACGAA TCATAATCAA AGTCACATCT 
TATCTCACAT TCACATGTTC AAAACTATTC ATTTTACCCT GGATTTTCAT 
AGTAACATTT ATATTCGNGT CTTCTAATTT GTTTTCATCT CTAATGCCAG 
CTTGCAAATT TTTTCTTTTT TTTTCCTAAG TCAAATTTCT ANATAGCATC 
CTATATAATG ATTAGGGTTA TCATTTCGCT CGNGTAGGCT AATTATCGAT 
TTTCTTTTCT TTTCAAAGAC ACATACTCAG NGCTAGAGAG GAGCTATTTG 
TTTCCGTAAT CCTGGGCCTN TGANAGTTTT GAACAAACAT NTTAAGCTNT 
AACAAAACCC ATTNTTAGCG GGCCGNTTAT TTTTGGATTC TGAAGTCCAG 
TCC

3 prime edge [+] show sequence

Chromosome: 5; Position: 26231114 [Map]; Strand: c
- AT5G65630.1 - [+] show detail - global transcription factor group E7
  Distance: -2665; Region: intergenic
- AT5G65640.1 - [+] show detail - beta HLH protein 93
  Distance: -5941; Region: intergenic

CTTTATTCGG ANNAGGTATT TTATCGACCG TTACCGACCG TTTTCATGTG 
CTCCACCTCG AGATATCAAG GTTTCTTTGA TCGAATTGAA AAGTTTCAAA 
TGATGTTCAA GATATTGTTA TGTCTGATTG AATAGTTAAA ATATCTCTTC 
TTTTTTTATA ATATATTTTG AACGTAACAT ATAGTTTTAT CAACAACAAC 
AAAAACGTAA GACATTCTAT GACGATACCT AAAACGGCTT TGATGCTAAA 
ATTTCTCTAT CCATGACGAT AATTTAAACG GCCTAGCCGC TATTTGATTC 
ACTGTGTGGC GTATTTGTTT TACTAAGTCA ATGTGCCTCC TAAATGCAGA 
ATATACGGGA ATGATCTTTT GCCCTTCGTT TCACGCAAAG TGCTAAAACT 
TTAACCATAT AAAACTCCCG AAATATAATT TAGTTCGCAC AAATAATATC 
ATGACATCAG TAAAGAGGAC CCGAGAGAAA TCCGGGGGAC CCGAGATCGT 
GTTGTATGTG TGTGAGAGTC TATGCTAAAA TCTAAAGTTA TGATGCAACA 
CTATGTTTTT CTGTACACAA TAATGTTTTG TATAAATTAT TTTAGAATT

AT5G65630.1

Model type: Protein coding
Short Description: global transcription factor group E7
Curator Summary: This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.
Computational Description: global transcription factor group E7 (GTE7); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: global transcription factor group E2 (TAIR:AT5G10550.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G65640.1

Model type: Protein coding
Short Description: beta HLH protein 93
Computational Description: beta HLH protein 93 (bHLH093); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G10570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR