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Mutant Lines
54-3656-1

54-3656-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 23108452 [Map]; Strand: w
  - AT3G62470.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (5UTR)
  - AT3G62475.1 - [+] show detail - transposable element gene
    Distance: -648; Region: promoter
Flanking Genome Sequence: 54-3656-1 - 5-prime edge
```
GCCATGGAGC AGCAGCCATG GAAGCTCGAC GGCGGTTAGC AATGGCGAAG 
TCGGTGAAAA GCCACTGATT TACTGGCGGA GAGCTCTTCA CGTATTTGGG 
CCTTTGTTTG ATTAGAAGCT
```
3 prime edge [+] show sequence
1. Chromosome: 3; Position: 23108336 [Map]; Strand: w
  - AT3G62470.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
    Distance: 0; Region: exon1 (CDS)
  - AT3G62475.1 - [+] show detail - transposable element gene
    Distance: -764; Region: promoter
Flanking Genome Sequence: 54-3656-1 - 3-prime edge
```
TCCATGGCTC CATCTCTCTA GGAGAAGAAG CTCCACTCAG ACTTCATTAA 
GAAGCT
```

AT3G62470.1

Model type: Protein coding
Short Description: Pentatricopeptide repeat (PPR) superfamily protein
Computational Description: Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 39079 Blast hits to 12185 proteins in 290 species: Archae - 4; Bacteria - 32; Metazoa - 449; Fungi - 607; Plants - 36694; Viruses - 0; Other Eukaryotes - 1293 (source: NCBI BLink).
Link: InterPro Scan - TAIR