Home
Mutant Lines
54-3668-1

54-3668-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 26456650 [Map]; Strand: w
- AT5G66200.1 - [+] show detail - armadillo repeat only 2
  Distance: -828; Region: promoter
- AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon11 (3UTR)
- AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron13 (3UTR)
- AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon12 (3UTR)
- AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron11 (CDS)

CCCACTTATC TTACAACCAA CATTACATAT AAGAAGATAA GACATATCAC 
ATCCCAACAA ATTACATTCT GTATCCTTTA CTTACTCCTC TTCTAGTATA 
TACTATCGAA GATTCCTGTG ACCTGCAGGG CTTGGTGCTC TCTGTGAACT 
TATGCTCGCT GTTCTTAGAA GTCTCCTGAA CTCATGCAGG CTTATTTTCC 
CATCTCTGTC TATGTCTGCT TCATCCAGCA GTGGATCTAT TGATCCTCTT 
AACCCCGTGT GCTGAGGATT CACAAACAAA TTGGGTTTCA TCACCCACTT 
ACCTAAACAT CTACTCTACC GTACGAGAAT ATTGATAAGA GGTTAGTTCA 
GCTTACCATT CGAAGTTCCT CAGGCGTTAT GTACCCGTCT TTGTCTAGGT 
CGAATTTCTC AAAAGCTGCT CTTGACCTTA GCTGCCATTT CTCTGAATCA 
TGTTCTTCTA GTTGATGAAC ATGTAGAGCT GCTGCTACAA ACTCTGTGAA 
GTCCACTAAC CCATCAGTGT TGCTATCAAT CTGTGACCAG CAAAGATACA 
AGTACACAAC GGCTCATTAT GAAACTACGT CTCCCTCTGA TACCCCCAGA 
GATGCAATTG CAATGGAAAA CAAAAATATA ACTACCGCTT CAAGGATCTC 
AGCAACTCGT GAGTCTTTCA GTTTCCAAGG AAGATCTTG

3 prime edge [+] show sequence

Chromosome: 5; Position: 26456534 [Map]; Strand: w
- AT5G66200.1 - [+] show detail - armadillo repeat only 2
  Distance: -712; Region: promoter
- AT5G66210.4 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon11 (3UTR)
- AT5G66210.2 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon14 (3UTR)
- AT5G66210.1 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: exon12 (3UTR)
- AT5G66210.3 - [+] show detail - calcium-dependent protein kinase 28
  Distance: 0; Region: intron11 (CDS)

TAAGTGGGGT TTTTGGCGTT TGTAGTGATA AGTAAGTAAT ACTTTGGTTG 
TTTAAGGCGC AGCAAAACAA AGAGAGAAAG TGGAGTGAGA ATCCCATTGA 
TGAAATATGA GAGAGCTCTT AAGGTGCACT AGATGCAAGA GGACACNGTG 
GCATTCCCTG AATGGGGGAC AAATCCAATT TTAAATTTTT AATGGTTGGG 
CACCAAAAGA AACATAGAGA GCCAGCTGTA ATTTCGATTC TATCATATAT 
TTTGTCTGTT TCCATTTTTC TTATAATATT CGTTTTGAGA GCACCAAACA 
AACCCTTTTC TATGAGTATT TTCCAGCCAG GATCTGAGTG GCTCCAACGA 
ATTTAGTAAA CAATGATTGA TTAAATGTTT ATTAAGGGAA TATCTCAAAT 
CTTATTGGAT ATAAAAAATA ATAAAATCAT CGCAAGTGAC AGTGGTCTAT 
AAATGTGTGC ATTTTCGCAG GTTCGGTGAA TGTAAATGGG TGAGTCTCTG 
AATTTGACTA GTCACGTTTA AAGATACTAA TAATATTAGA TTATGATAAC 
TTGGTTTAAA ATTAGAAAGG TTGATGAAAA GACACTAAAT CCGGGATATG 
TTTATCAAAA TGCATATGGT ATGTCTTCTT CTTTGGCTTT TTCTTTATTT 
CCGAAGATGG GAAAAGTCAG TAAACAAGGA GGGGCATAAT AGTAGTTTAT 
TACAGTAATC AGC

AT5G66200.1

Model type: Protein coding
Short Description: armadillo repeat only 2
Curator Summary: Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.
Computational Description: armadillo repeat only 2 (ARO2); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: armadillo repeat only 1 (TAIR:AT4G34940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.1

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 124563 Blast hits to 121753 proteins in 3731 species: Archae - 157; Bacteria - 14240; Metazoa - 45960; Fungi - 14836; Plants - 27830; Viruses - 455; Other Eukaryotes - 21085 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.2

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.3

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, ATP binding, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 122907 Blast hits to 120110 proteins in 3700 species: Archae - 157; Bacteria - 14345; Metazoa - 44968; Fungi - 14295; Plants - 27583; Viruses - 455; Other Eukaryotes - 21104 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G66210.4

Model type: Protein coding
Short Description: calcium-dependent protein kinase 28
Curator Summary: member of Calcium Dependent Protein Kinase
Computational Description: calcium-dependent protein kinase 28 (CPK28); FUNCTIONS IN: protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, protein kinase activity, calcium ion binding, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), EF-hand-like domain (InterPro:IPR011992), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 16 (TAIR:AT2G17890.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR