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54-3671-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25332790 [Map]; Strand: w
      • AT5G63150.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 1946; Region: intergenic
      • AT5G63160.1 - [+] show detail - BTB and TAZ domain protein 1
        Distance: 473; Region: intergenic
    Flanking Genome Sequence: 54-3671-1 - 5-prime edge 
    GTTAAGAAGT ATGAATTGAA ATGTAAGAGT AATTGACATC CGACACGAAA 
    CCACATTGCG TGGTTCATCT GTTCCCCACG CGTCTTTCCT TTTTCCAGTC 
    GAACCCAAGT ATGAATGAAT AATGTAATAA AATATCTCTG TTTTAACTTA 
    TAATAAGCAC ATGTTTTTTT CTAATAATTT GCTTTGTTTG CTTTTGAATC 
    CTCAATCATG ATCAACCTTC CACTATACCA GTGACTAAGA CCGGTTGGTC 
    AATTTCGATC TCCAATATTG AATTTCTATT TTTTCCATCC AGATTCTCAT 
    GCATAGTTAA AACTATTGTG ATTGATTAGA CCGATCCAAC TTGAATATCG 
    TTTAGATTTT TTGTGATTCA TATGCAATCA GGTCGGTCAA TATAATTTGG 
    CATGACCAAT CAGCGACAAT TATTTGTTTC CATCTTGTCA CACTTGAAAT 
    TATTTAGATT CAGTAATCCT TTTGCGTTTG ACGTTAGCTA GTTTAAACCG 
    GATCAATCTG TATACTTTTT GCCACAAAGT CTCCAAAAAC CCTAATACCA 
    TTTTATAACC AATAACAAAT TTATATATAA TTCGACCGAC CAAACAAAAC 
    GACAGATTCA AAGGGTTACT CATTGACAAG TTTAACCCAA TCAACCAGTC 
    CGAGAGACAA TAACAACAAA TAACCTTNCG ACTCAAGTA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25332674 [Map]; Strand: w
      • AT5G63150.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 1830; Region: intergenic
      • AT5G63160.1 - [+] show detail - BTB and TAZ domain protein 1
        Distance: 589; Region: intergenic
    Flanking Genome Sequence: 54-3671-1 - 3-prime edge 
    TTCTTAACTA CCAGATGAAT GCACTTAATA AAAAAAAAAT CAAATNCAAG 
    AATTGTTCTT TTGAAATGGA AATGAATATT TTCATGTTAT AACAAGAGTT 
    TTGACATAAA AAGGTTAAAC AACTTCGAGC CTAAAGTTTC AACATGAAAC 
    TTATTCTAAA TNGTTATTTT TACATATTTT GAANAAAAAA NCAAAAAAGA 
    AGTTGACAAT NTCATTGNGA CAACCCGTAA AGCT

AT5G63150.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1713, mitochondria (InterPro:IPR013177); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G63160.1

Model type
Protein coding
Short Description
BTB and TAZ domain protein 1
Curator Summary
BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development.
Computational Description
BTB and TAZ domain protein 1 (BT1); CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Zinc finger, TAZ-type (InterPro:IPR000197), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB and TAZ domain protein 2 (TAIR:AT3G48360.1); Has 1462 Blast hits to 1460 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 839; Fungi - 0; Plants - 555; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink).
Link
InterPro Scan - TAIR