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54-3678-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 412443 [Map]; Strand: w
      • AT2G01905.1 - [+] show detail - cyclin J18
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 54-3678-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAC ACATACACAA AAAGATAGAA AGAAGAAAAG
    TCTATTTCTA TTTATTTCTT CGGGTCCCTC TCCAAAATTT ATTCTTCTTC
    ATTTATGGAG TCTACACTAC ATTGTTCTGA GATTTGTTCT CTATATACTC
    CTTTTCAGTT TTTTTTCACA TTTCATGGTA ACAAATAGGA TCTCTTTCGA
    ACTATACCAA ATTCTAGAAG ACATGATTTC TGTCTAAATC TTTCACCTAC
    TCTTTTATAT ACACATGTAC ATGTTGATCC ACGTGGTATG AGTCTTTGGT
    ATAAAGTTAA AAAAATGTTA GGCCTATCTT ATTTTTAGGG ACCATTGTCG
    AAACTAGAAA GAAGTAGAGT GAGGTTTCTA AGGTTAGGAG AGGGTAGGCA
    CTAGACATAG TTTTGTTCTG CTTCTGTGTT ACATGACTCT GTTATTAGAG
    AATAGAAACA ACAAAAATTT AAGACTTAAA GGCAATGATG ACCCTAATTT
    TTATGAGTAG GGGATGTATA GTTTAATTAT TCATCAATAT TATTTGGCCC
    TACTTCGACC ACCTACCATT TTCATTTTCA GTTTGATTTT CAAAAAATGG
    ATATGATGTT GTGAAATAAC AACAACTTCA AATTAAGTAT TTTTGAAATT
    CAATAGATAG TAAAACCTTC CATTGAGATT TTTAGTTCTT GGATAATGAC
    AAATATGA
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 412439 [Map]; Strand: w
      • AT2G01905.1 - [+] show detail - cyclin J18
        Distance: 0; Region: intron8 (CDS)
    Flanking Genome Sequence: 54-3678-1 - 3-prime edge
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATAAGT 
    GTGTGAGTGT GTAACAGCTA TAACTCCATG AAAATGAGGT ATGTTTTTTC
    AATAAGATAA AGGAAATGCT GACGTTTGAC TAGTGACTTC TACTATTACT
    GTCTCCTATA TCTTATACGG TCCGGTACAA TATTTGAGTG GTCCGGACCG
    GAGATATGTT AGGTTTAGCA AAATGTTATG GACCACAAAA GATCTGATTG
    ATCCGTAAAC CGTATATACG TATATGGCCG GTGGTCAGAA CTGATAAGTC
    AACCTTGATG GGCTCATTAT CATAATAATT AAGTATTAGG TGAGGAACAT
    ACAATGTCCA GGTCTAAGGG GCAATTTGAA GAAGACCTTG AAGTGTGAAC
    AAGACACTCT TTTTTGTGAT GTTGAAATGC ATTGTCAAAA AGGTGAACAT
    TGGGCCTTAT TGATCCTATA TGCTATAACC TGTTTCTAAC TTATTCAGTA
    TCCTATGACT TGATTAATAT AAATCTATCA TTGGTAATTG TATTTATAAA
    ATGGTTTTGA TAGAAAGAGC AGAAAGATGA ATGCTTACCC CAGGGGAGAA
    TAGGGAATT

AT2G01905.1

Model type
Protein coding
Short Description
cyclin J18
Curator Summary
cyclin J18 (cycJ18)
Computational Description
cyclin J18 (CYCJ18); CONTAINS InterPro DOMAIN/s: Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR