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54-3702-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23107405 [Map]; Strand: w
      • AT3G62470.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3702-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCAG 
    TGACATTGTA GCTCACAACG TAATGCTTGA AGGGTTGTTG AGGAGTAGGA 
    AAAAATCAGA TGCGATCAAA TTGTTCCATG TTATGAAATC CAAGGGACCT 
    TGCCCTAATG TCCGTAGCTA TACCATCATG ATCCGGGACT TCTGCAAACA 
    GTCGAGCATG GAAACTGCCA TTGAGTACTT TGATGACATG GTTGATTCCG 
    GGTTGCAACC TGATGCTGCG GTTTACACGT GTCTGATCAC GGGGTTTGGG 
    ACTCAGAAGA AGCTGGATAC TGTTTACGAA CTGCTCAAGG AGATGCAAGA 
    AAAGGGACAT CCTCCGGATG GCAAAACGTA TAATGCGTTG ATCAAACTGA 
    TGGCGAACCA GAAAATGCCG GAACATGCCA CAAGGATCTA CAACAAGATG 
    ATCCAGAACG AAATTGAGCC ATCGATACAC ACATTCAACA TGATAATGAA 
    ATCATACTTC ATGGCGAGAA ACTATGAGAT GGGGAGAGCA GTTTGGGAAG 
    AGATGATCAA GAAAGGGATT TGTCCTGACG ATAACTCCTA CACGGTTTTG 
    ATCAGAGGGC TTATAGGTGA AGGCAAGTCG AGAGAGGCAT GCAGATACTT 
    AGAGGAGATG CTTGACAAAG GAATGAAAAC CCCTTTGATT GATTATAACA 
    AGTTTGCAGC TGATTTCCAC AGAGGGGGGC AACCGGAGAT ATTTGAGGAA 
    TTGGCACAGA GAGCTAAGT

AT3G62470.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62540.1); Has 39079 Blast hits to 12185 proteins in 290 species: Archae - 4; Bacteria - 32; Metazoa - 449; Fungi - 607; Plants - 36694; Viruses - 0; Other Eukaryotes - 1293 (source: NCBI BLink).
Link
InterPro Scan - TAIR