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Mutant Lines
54-3703-1

54-3703-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 160708 [Map]; Strand: c
- AT2G01330.1 - [+] show detail - nucleotide binding
  Distance: 0; Region: exon1 (CDS)
- AT2G01330.2 - [+] show detail - nucleotide binding
  Distance: 0; Region: exon1 (CDS)

ATTCTTCCTA CCAACAATTC CACGATGGCG AAACTCCTCG AGACCTTTCC 
TTGTGTTCCC TCCACCGAAC GAGGCCGCGG CATTTTGATC TCCGGCGATT 
CCAAATCCGA CACCATTCTC TACTGCAACG GCCGCTCTGT CTTCATCCGG 
AGCCTCCGCC AACTCCAAGA CGTCCAAGTT TACGGCGAAC ATGGCTATGC 
TGTTACCGTT GCTCGCTACT CTCCCAACGG CGAATGGATC GCTTCCGCTG 
ATGTCTCTGG TACTGTTCGC GTTTGGGGAA CGCACAACGG CTTCGTGCTG 
AAGAACGAGT TCAGAGTCCT TGCTGGTCGT GTCGATGATC TCCAATGGTC 
TTTCGATGGA CTTCGAATTG TTGCTTCCGG CGATGGAAAA GGCAAATCTC 
TTGTTCGATC CTTCGCGTGA GTTTCTCCTC CACTTCTTCT TCTTCTTCTT 
TCCTGATTTT GAGATTCAAT TTCGAGTCCT TGGTAATTAG GCAAACAATT 
TAGGTTTTAA TGATGACTTT GTAGAATGGA ATGATCTCTA GGGCTTGATC 
AATTTGTGTT TGTTTTATAT ATGTAGATGG GACTCTGGCA ATACAATGGG 
GGATTTTGAT GGCCATTCTC GTAGGGTTTT GAGTTGTGCC TTCAAGCCAA 
CGAGACCTTT CCGAATTGCC ACATGCNGNG A

3 prime edge [+] show sequence

Chromosome: 2; Position: 160824 [Map]; Strand: c
- AT2G01330.1 - [+] show detail - nucleotide binding
  Distance: 0; Region: exon1 (5UTR)
- AT2G01330.2 - [+] show detail - nucleotide binding
  Distance: 0; Region: exon1 (5UTR)

GGAAGAATCG GTGAAGGAGT GCGTCATTTC TTCTTCTTCT TCTTCTTCTT 
CTTCAGAGGA GGAGGAGAAA GTTTAGGAGG AAATTAAGGG TTGGGGATTT 
TGAACGATTC ATCAAACATT TGCTAATTTT GAGTCAGCTG ATGTCGAGAG 
ACATTGTACC GGCTTTTTCT GGTCTGGTTT GATGTTTTTT CGGTTATTAG 
TTAAATCACA AATACTGAAC CGGCAGTGGT TGGGTTGGGT TTGGTTGGGC 
CATAGCCCAT AGCTAAATCT CTTTCCTAGG TTCTTTGCTC TTTTCAGCTA 
CCAATTCTCT TCTCGCTTGT TAGGCCTGGC CAAATAAACC AAACTGAATA 
TATCAAACCC AAACCAAAGT AAAATAATCG AACTAAATTG AACTGAAAAA 
TTTAAAATAA CTGAATGAAT ACTAAATTCT ATAATTGAAA GAACCAAAGT 
CGAATCGGTA TTATACCGAA ATATTTGGAT AACCGAAAAT ATCCGAAATA 
TATTAGTTAT TTCTATATTA AATAATTAAA AATATGTGAA ATATATATAT 
AATAGTAAAA ATAATCGAAA ATAACCGAAA AATATCTGAA ATATCTAAAA 
ATAACTGAAA TGTACGAAAA TTTTGAAAGC AAAATAACCG AATGGATACG 
AAATTTTAAA ACCGAAAGAA CAGGATC

AT2G01330.1

Model type: Protein coding
Short Description: nucleotide binding
Computational Description: nucleotide binding; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01330.2

Model type: Protein coding
Short Description: nucleotide binding
Computational Description: nucleotide binding; FUNCTIONS IN: nucleotide binding; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT3G18060.1).
Link: InterPro Scan - TAIR