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54-3714-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19641834 [Map]; Strand: w
      • AT2G48010.1 - [+] show detail - receptor-like kinase in in flowers 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3714-1 - 5-prime edge 
    CNNGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCC TAACTCCTCC CTCGCCACCA CTGCCATGCG 
    CTGTAACACC TCTCTCGAGA GCAATACCCC TTGCGCCTCC TGCACTCAGA 
    GCCTGTCCGC GTTTCAGTCC TATCTCTCCG GTCCATCCCT CGGTAATGTC 
    TCCGACTGTG CTTCTTTTCC CTCTATCTAC GCCGCTGCTT TCGCCAATTC 
    CTTGGGCCCC ACCGACAAAG GCACCGCCAA ATGCTTGNTT CAGCTCGATT 
    NGGNTTCTCC CACTAGCTGC GGTGCTAACA AAGAACAAAG TTCTAGTTTC 
    TTCTTGCTCT GNTNTGGTCG TCGACTCTGA NCNGGTTATC ACGNGNTNGG 
    ANCTGGTGGN GTCNNAGGAA GAAAAGCATG CTACTGGTNT ANGGACGACN 
    NCCANGAATG CTCTNGCCAT AGGTTATATT GAACANNCAT ACTAACGNTA 
    ATACGACATT NACNTGNTAA TGNNNCATAT AANGAGAATN GNNNTTAAGG 
    GAATAGANAA TNGCTATNNA AAANATNNAA TNNNTTNAAA ATGAATGGNN 
    CGGATNGGNG NNGTTNANTA TNNNNNATNA ANACCNATNT NNNTNAGGNG 
    GGAGNANNGT AGNNNCNTGN CTGGNNNGNC NNAANACTAN NNNAAGGNGA 
    ANNNNTNAAN NGNNNGANNT GNGGGNTTNT GATGGAAGAA NTAAGNNNNN 
    TANNAAGNNA AAANTGAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19641784 [Map]; Strand: w
      • AT2G48000.1 - [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
        Distance: -981; Region: promoter
      • AT2G48010.1 - [+] show detail - receptor-like kinase in in flowers 3
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 54-3714-1 - 3-prime edge 
    GTTAGGGATA AGGGATTCGA ATTGAGACCT GGTGGTGATG TCCATGCACC 
    CCTGCGAAAT CCACGGCGTC TGGAAACCGC AGGTGGATCG GACGTCAAAG 
    CGAGGGAGGA AACCGGCGAC GGAAGACTGG AGAGCAGCCC AGCAAGAAGC 
    AGCAGACTCA GGTGGCGGGA GAAAGGAACC CGTCTGACGG AGATGGTGAG 
    AGTAGAGGAG GCGTAGCCCT TGGAGGAGGT ACTGGCAGGT GGTGGCGCCA 
    TCGGGTTTCG GACGCCGGAA CGGTTCAAGG ACGGAAAAGT CCAGAGGACA 
    CNGTGGAGTT CTGAGCGGCG GAGAAAGAGG TGAAGACAAA GAAGACGACG 
    GCGATTCGAC GGAGAAACAA CATCTAATTC GAAGAAAATT ACTAATTGAC 
    AATAAAGACA TAACATAACA CTCTCTCTCT CTCTCTCTTT GTTTCTTACA 
    CTCATTGACC CACTAGTAAT ATTTTGGTCA TTAGTTAAAT ATATATATAC 
    TCTTAAGTGT ATTATTGATT GTGTTATTTA CTTGATTTAC TTGAAACGGT 
    CAAAACATGT CATGAACCTA ATTGAGTCTC ATCCACGAAG TTGCACGAGA 
    ACTTTCCTTT CACTTTNTGT TTCATTTTCA TACTATTCAA TCAATAGTGG 
    TAATCTGGTG AGAGATGATN ATATTTAAAA TTCTTGATTG GATC

AT2G48000.1

Model type
Protein coding
Short Description
Pentatricopeptide repeat (PPR) superfamily protein
Computational Description
Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G30780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G48010.1

Model type
Protein coding
Short Description
receptor-like kinase in in flowers 3
Curator Summary
receptor-like serine/threonine kinase (RKF3)
Computational Description
receptor-like kinase in in flowers 3 (RKF3); FUNCTIONS IN: receptor signaling protein serine/threonine kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G11050.1); Has 112833 Blast hits to 111726 proteins in 4356 species: Archae - 97; Bacteria - 12546; Metazoa - 41926; Fungi - 9138; Plants - 32648; Viruses - 383; Other Eukaryotes - 16095 (source: NCBI BLink).
Link
InterPro Scan - TAIR