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54-3758-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 156549 [Map]; Strand: w
      • AT4G00355.3 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 173; Region: intergenic
      • AT4G00356.1 - [+] show detail
        Distance: 25; Region: intergenic
    Flanking Genome Sequence: 54-3758-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT AGTAGAAACT AAGAATTCCA ATAAAATTAG 
    TTGTAAAGAC AACAACAACA TTGAAGAGTG TCTACACTAG GATTAGGAAT 
    ACACAAAGCA CGACTAGGTT TGCCTCCACA AGTCGCGATA CAATCATTTT 
    TCATTCGGCA TGGTCCTTTG AATTTCACAT TATAGAAACG TATCATCCAT 
    AACTCCTGTT CGATCATTTT ACAAAATTTA TCATCAACAT CATAATTCTC 
    TGTTAGTAAC TTACATGATT GATTGGTCTT GTTCTTTATG AAGTTTTTTT 
    TTTNATNTTN GTTNGAAAAA NCANTCNTAA NTTTNCGTNT NAATNNNAAC 
    TTTTTTTTTT NTNANCCGTT TNANCCNCTT TNAANGGGGG GGGGGGGGGG 
    AAANCTANGC TTNGGGNAAA NGGCCTTTTC CCCTNCTTNT AAANCTTNTT 
    NTTTNCCNCN TNNGNACNNN ACTTNTTNAA AACNCCTTTN ANNAAANTNN 
    ANAAAGGNNN NNNTNGTTNN TNNNNAANAA ANNNTTTTTT GGGNNAAAAA 
    AANGNTTNNN NNTTTTNNNN GGGGGNGGGG GG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 156545 [Map]; Strand: w
      • AT4G00355.3 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 169; Region: intergenic
      • AT4G00356.1 - [+] show detail
        Distance: 29; Region: intergenic
    Flanking Genome Sequence: 54-3758-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTATTCTACT 
    ATTGAAATAA AAATGTTCTA CCAATATATT ATTCAATCGT GCCATATAAT 
    ACTTTATCAT ATCTTCGTCT TTAAACATGA ATAAAATTTC ATGATAATTT 
    TTTTTTCTTT TATGTAAGAT CATGTAAATG TTGGTATATA GGGTGAATGT 
    GAATGTGATT TTTGTTGTTT TCAAAATTCT CTAACCAAAA TAAAGAGTTT 
    TCAATTTGAC CAACAAAAAC ATAACAGGAG ACACNTGAGT ATCTGATTAT 
    GATATAAACA GAGAAAGAGA GTAATAGGGC ATTGAGATAA TGAAATGGGT 
    AAATGATTGT TTCACACCAA AGAAATATGT ACAAAAACCA TGACCTGAAG 
    AGAAGTACCA AACACATTCA CACACCAGAC TTAAACCATT ACATTACATC 
    CATGTTTTTC GACCCCAAAG AAGCTACTCT TGTTCTTATC GTCATCATCA 
    AAGTAATTCA CCTTTTTGTT TTGATTTAAC GGTCGTTTTG GGCGCTGGCT 
    CGGATGAATG AATCCCGCCG CTGTCCCCCG ACAAATGCTT GTTTTAGTCG 
    AGAGATTGGC CCCATCAATC TTCCAGCTTT CTGCAACCAA AGAGTGGTTG 
    TTACATAGTT AAGACTCACA TCATACCATG GAGGTTCGAA AAATAGTGAT 
    CCTAAACTAA ATACCTCGTT TCCAATGCTT GATTCCCACT TTTGCTGCAA 
    AATCTGCCAC CTCTNCTGTT GCCAATGTTG GCC

AT4G00355.3

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits to 97 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00356.1

Model type
Pseudogene
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Link
InterPro Scan - TAIR