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54-3773-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11584195 [Map]; Strand: w
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 3648; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 2321; Region: intergenic
    Flanking Genome Sequence: 54-3773-1 - 5-prime edge 
    ACCGTGACGT TATTGATTTT TTTTTTNTTT CTNGGGNCAA GTTTNGGGTN 
    GGGCNGAATT TGGTTNCTTT GGTAANGTCC NGCTTTTTNG TAACCTTNNA 
    GGGNGTTGGN AGGTTTTTTN GCGNNAAANA TNATTGGTTT TNGGNAGGGT 
    TGNAGTTTNN AGGGTTAANG TTGGGGTTTG NAGTTNNAGN GCATNGGGTT 
    NNAGNNATTT NCGGGTCNGG NAACGNGNCN GTTTNNAAAN AACGGGGGTT 
    TNCCNATAGG GGNAGTAACC AAAACAAGCN AAAACTNANT NNTTAAAANA 
    CAAANAACCN GTCGNNANGA CCCACCAANC NTGAAAATAN AGGGANANAT 
    ATCNGACCNG TCNTATNCNC AAANATNTCA NCNTNAGTCA ANAAACACAA 
    CCCCTTACTN GGACTNACTA CTAANCCAAA ATTTCACCNG AANTNCACCN 
    CATAACCCAT AAAANGAANC CACAAAATCA ANGCCAANAA AAAAAAAAAC 
    TGGGTAANAG GNGTTAANAT AGCCAAAATC NGACCGCTGG CTAACTTAAT 
    NACTTNNAAT CTGGANGNGN ATGACAAANA TCCAAGCTGA AAAACATAAC 
    TATCAAAAAC AATCTACCCA TGAGGAACAA AACGGNGGAN ACCCCTTANG 
    AGGATAAAAA GAAACTCCAA TGCNTNATNT AGGCAACAAC ATAAATGGAA 
    ACAGGGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 11584091 [Map]; Strand: w
      • AT1G32172.1 - [+] show detail - other RNA
        Distance: 3544; Region: intergenic
      • AT1G32180.1 - [+] show detail - cellulose synthase-like D6
        Distance: 2425; Region: intergenic
    Flanking Genome Sequence: 54-3773-1 - 3-prime edge 
    GTCACGGTTA ATATCTTTTT TTCTTATTGG TAAGAACTTT GAGATCCTGT 
    TGCGAAGTCA ATTTCAGGTA AGTATCTTTA TCTTCCTATT TTTCTTCCGT 
    TTTTTTATCT CTTACAACTT ACAAGTTACA ACTATTAATC TTTTTGTTAA 
    CAATTTTGTA CTTTGTATGC TATTCCAAAA GAGAAATTCA AGCCACTACA 
    AGCGAAAATG GTGTCTTACA TACAAAAGTA AAGAGGTAAC CAATGTATTT 
    ACTTGATGTA ATCTTTTTGT TAACAACTAG ATATGTTTCG TCATGTGATT 
    TTAAGTGAAG GGGTATCGGT GATGATTCAA AATCCAAGAA AAACACTAAA 
    GTTTTAGGGT AAAGCT

AT1G32172.1

Model type
Other RNA
Short Description
other RNA
Link
InterPro Scan - TAIR

AT1G32180.1

Model type
Protein coding
Short Description
cellulose synthase-like D6
Curator Summary
encodes a gene similar to cellulose synthase
Computational Description
cellulose synthase-like D6 (CSLD6); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: plant-type cell wall biogenesis, cellulose biosynthetic process, polysaccharide biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: leaf whorl, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cellulose synthase (InterPro:IPR005150); BEST Arabidopsis thaliana protein match is: cellulose-synthase like D2 (TAIR:AT5G16910.1); Has 3332 Blast hits to 2680 proteins in 615 species: Archae - 13; Bacteria - 1453; Metazoa - 5; Fungi - 21; Plants - 1756; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Link
InterPro Scan - TAIR